KEGG   Streptomyces nitrosporeus: CP967_07930
Entry
CP967_07930       CDS       T06889                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
snk  Streptomyces nitrosporeus
Pathway
snk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:snk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CP967_07930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:snk03019]
    CP967_07930
Messenger RNA biogenesis [BR:snk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CP967_07930
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: QEU71900
UniProt: A0A5J6FAD9
LinkDB
Position
complement(1865587..1867272)
AA seq 561 aa
MSHPHPELGTPPKLPKGGLRVTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLFPEEEQPGI
DLILPDFTTIRDRLDDVEGIVLTHGHEDHIGGVPYLLRLKPDIPLIGSKLTLALIEAKLQ
EHRIRPYTLEVVEGQRERIGLFDCEFIAVNHSIPDALAVAIRTPAGLAVATGDFKMDQLP
LDGRLTDLHAFARLSEEGIDLLLSDSTNAEVPGFVPPERDISNVLRTVFATAQKRIIVAS
FASHVHRIQQILDAAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPAGLVVDVRTLDDLPD
DEVVLVCTGSQGEPMAALSRMANRDHQIRIVPGDTVILASSLIPGNENAVYRVINGLTRW
GANVVHKGNAKVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGALTGVPKD
HIVIAEDGVVVDLVDGKAKIVGKVQAGYVYVDGLSVGDVTETSLKDRRILGDEGIISVFI
VVDSSSGKIVGGPHIQARGSGIDDGAFTAVVPKVEEALNKSAQDGVMEPHQLQQLVRRTV
GKWVSDTYRRRPMILPVVVEV
NT seq 1686 nt   +upstreamnt  +downstreamnt
ttgagtcatccgcaccctgaactcggtaccccgccgaagctcccgaagggcggtctgcgg
gtcaccccgctcggcggcctgggggagatcggccgcaacatgacggtcttcgagtacggc
ggccgcctgctcatcgtcgactgcggcgtgctcttccccgaggaggagcagcccggtatc
gacctgatcctgcccgacttcaccaccatccgggaccgcctggacgacgtcgagggcatc
gtcctcacgcacggccacgaggaccacatcggtggtgtcccctatctgctccggctgaag
ccggacatcccgctcatcggctccaagctcaccctcgcgctcatcgaggcgaagctccag
gagcaccggatccgtccctacaccctggaggtggtggaggggcagcgggagcgcatcggc
ctcttcgactgcgagttcatcgcggtcaaccactccatcccggacgcgctggcggtcgcc
atccgcaccccggccggcctggcggtggccaccggcgacttcaagatggaccagctcccg
ctggacggccgcctcaccgacctgcacgccttcgcgcggctgagcgaggagggcatcgac
ctgctgctctccgattcgaccaacgccgaggtcccgggcttcgtcccgccggagcgggac
atctccaacgtgctgcgcacggtcttcgcgaccgcccagaagcgcatcatcgtggccagc
ttcgccagccacgtccaccgcatccagcagatcctggacgccgcccacgagtacgggcgc
agggtcgccttcgtggggcgctccatggtccggaacatgggcatcgcccgtgacctgggc
tatctgaaggtccccgccggtctcgtcgtggacgtcaggacgctggacgacctgccggac
gacgaagtggtgctggtctgcacgggttcccagggcgagccgatggcggccctctcccgg
atggccaaccgggaccaccagatccggatcgtgccgggtgacacggtgatcctggcgtcg
tccctgatcccgggcaacgagaacgcggtctaccgcgtgatcaacggcctgacgcgctgg
ggcgccaacgtcgtccacaagggcaacgcgaaggtccacgtctcgggccacgcctcggcc
ggcgagctgctgtacttctacaacatctgcaagccgaagaacctgatgccggtacacggc
gaatggcgccacctgcgggccaacgccgagctcggcgcgctgaccggagtgccgaaggac
cacatcgtcatcgcggaggacggcgtggtcgtcgacctcgtcgacggcaaggcgaagatc
gtcggcaaggtccaggccggttatgtgtacgtcgacggcctctcggtcggcgacgtcacg
gagacctccctcaaggaccgccgcatcctcggcgacgaggggatcatctcggtcttcatc
gtggtcgacagctcctccggcaagatcgtgggcggcccgcacatccaggcccgcggctcg
ggcatcgacgacggcgcgttcaccgctgtcgtgcccaaggtcgaggaggctctcaacaag
tcggcgcaggacggggtgatggagccgcaccagctccagcagctggtccgccgcacggtg
ggcaagtgggtctccgacacctaccgccggcgcccgatgatccttccggtggtcgtcgag
gtctga

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