Streptomyces nitrosporeus: CP967_11105
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Entry
CP967_11105 CDS
T06889
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
snk
Streptomyces nitrosporeus
Pathway
snk03420
Nucleotide excision repair
snk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
snk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CP967_11105
03430 Mismatch repair
CP967_11105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snk03400
]
CP967_11105
Enzymes [BR:
snk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP967_11105
DNA repair and recombination proteins [BR:
snk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP967_11105
MMR (mismatch excision repair)
Other MMR factors
CP967_11105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QEU72468
UniProt:
A0A5J6F7V8
LinkDB
All DBs
Position
complement(2547462..2551115)
Genome browser
AA seq
1217 aa
AA seq
DB search
MSPRLTDPEQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALVAAGITDPETIDPDNPPGEPGISTYHAFAGRLL
TDHGLRIGLEPTTRLLADATRYQLAARVLREAPGPYPALTRSFPTLVSDLLALDAELAEH
LVRPEQLARYDTGLLRELATAKLTNADLRKIPETAEARRELLELTRRYREAKRSRDLIDF
GDQIALSAELALTRPEVGALLREEFRVVLLDEYQDTSVAQRLLLSALFGSGPDGGTGHAV
TAVGDPCQAIYGWRGASVANLDDFPRHFPHADGTPATRYSLSENRRSGGRLLHLANGLAD
PLRAMHEGVEALRPAPGAERDGTVRCALLRTHAEEIDWLGDSLAHLVRTGTPPGEIAVLC
RTAGDFPRIQAALVARDIPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLVRLLIGP
RWRIGPRDLALLGRRARLLVHRTGQGDGADPDRRLAEAVEGTDPAEVISLADALDTFLDS
GGHEDDQLPFSTEARVRYARLATELRELRRSLADPLMDVLHRVLAATGLEVELSASPQAL
AARRRETLGNFLDVAAGFAAVDKEASLLAFLAFLRTAAQYEKGLDNALPGGENTVKVLTA
HKSKGLEWDVVAVPGLVTGQFPSTRPRDAWTSQSKVLPHALRGDAPTLPAVGSWDAKGLK
AFKDAMKAHQHTEELRLGYVTFTRPRRLLLGSGHWWGPTQKKPHGPSAFLDALYEHCAAG
YGEIEVWADEPEPDEENPALREQEAEQAWPLPLDERALARRRAARDTVLAHLEALSAAPA
PGAYGTPDRPAARRPPHDAALPHDGEPPLYDEEPPYDEEEPPPYDEEPPYGEPVYDEPPY
DGLPGDGLPGHVEPLRDEEPSHGEGEPHGEGEPHGGGTPYGHDAPAGGPARPRVPAARAP
VEEAGALTAGTAAAPDGAGLPSDGPDLTPEELRTLASWDRDLDALAGELRRARAAVHDVV
VPASLSATQLLHLADDPDGFARELARPMPKPPQPAARRGTRFHAWVESRFEELPLPMLGP
DELPGGDDTEIADERDLAELKEAFERTAYARRTPYRVETPFQIILAGRVIRGRIDAVYRT
GDTYEIVDWKTTRHRTADPLQLAVYRLAWAELHHLDPEAVTATFLYVRTGETVRPARLPG
RAELERLLLDEPPPRGR
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
gtgtccccgcgcctcaccgacccggaacagctcaaggagctcctcgggatcccgttcacc
ccggagcagacggcctgcatcaccgcgccgcccgccccgcaggtgatcgtggccggggcc
ggctcgggcaagacgacggtgatggccgcccgggtggtgtggctggtcgggaccgggcag
gtcgcccccgaacaggtcctcggcctcaccttcaccaacaaggcggccggtgagctcgcc
gagcgcgtccgcaaggccctcgtcgccgccgggatcaccgacccggagaccatcgacccg
gacaacccccccggcgaacccggcatctccacctaccacgccttcgccggacggctgctc
accgaccacgggctgcggatcggactcgaacccaccacccgcctcctggccgacgccacc
cgctaccagctcgccgcccgggtcctgcgcgaggcccccggcccctaccccgccctcacc
cggtccttccccaccctcgtcagcgacctgctggccctggacgccgaactcgccgagcac
ctcgtacgccccgaacagctcgcccggtacgacaccgggctgctccgggaactcgccacg
gccaagctcaccaacgccgacctgcgcaagatccccgagaccgccgaggcccgccgcgaa
ctgctcgaactgacccggcgctaccgcgaggccaagcgcagccgggacctgatcgacttc
ggtgaccagatcgccctctccgccgagctggccctcacccggcccgaggtcggcgcgctg
ctgcgcgaggagttccgggtcgtcctgctcgacgagtaccaggacacctccgtcgcccag
cggctgctgctctccgccctcttcggcagcggccccgacggcggcaccggacacgccgtc
accgccgtcggcgacccctgccaggcgatctacggctggcgcggtgcgtccgtcgccaac
ctcgacgacttcccccgccacttcccgcacgccgacggcacccccgccacccgctactcc
ctcagcgagaaccggcgcagcggcggccggctcctccacctcgccaacggcctcgccgac
cccctgcgcgccatgcacgagggcgtcgaggcactgcgccccgcccccggcgccgaacgg
gacggcacggtccggtgcgccctgctgcgtacgcacgcggaggagatcgactggctcggc
gacagcctcgcccacctcgtgcgcaccggtacaccgcccggcgagatcgccgtcctgtgc
cggaccgccggagacttcccccgcatccaggccgcgctcgtcgcccgcgacatcccggtc
gaggtcgtcggcctgtccgggctgctgcacctccccgaggtcgccgacctcgtcgccgtc
tgcgaggtcctccaggacccgggggccaacgcctccctggtccggctgctcatcggcccg
cgctggcggatcggcccccgcgacctcgccctgctcggacggcgcgcccggctcctcgtc
caccggaccgggcagggcgacggcgccgaccccgaccgccggctggcggaggccgtcgag
ggcaccgacccggccgaggtcatctccctcgcggacgccctcgacaccttcctggactcc
ggcggccacgaggacgaccagctgcccttctccaccgaggcccgggtgcggtacgcccgc
ctcgccaccgagctgcgggagctgcgccgttcgctggccgacccgctcatggacgtactc
caccgggtcctcgccgccaccggcctcgaggtggaactctccgcctcgccgcaggccctg
gccgcccggcgccgcgagaccctcggcaacttcctggacgtcgcggccgggttcgccgcc
gtcgacaaggaggcgtccctgctcgccttcctcgccttcctgcgcaccgccgcccagtac
gagaagggcctcgacaacgccctgcccggcggcgagaacaccgtcaaggtcctcaccgcg
cacaagtccaagggcctggagtgggacgtggtcgccgtccccgggctggtcaccggccag
ttccccagcacccggcccagggacgcctggacctcgcagtccaaggtgctgccgcacgcc
ctgcgcggagacgccccgaccctcccggccgtcggctcctgggacgccaagggcctcaag
gcgttcaaggacgcgatgaaggcccaccagcacaccgaggaactgcgcctggggtacgtc
accttcacccgcccgcgccggctgctcctcggctccgggcactggtgggggcccacccag
aagaaaccgcacggcccgtccgccttcctggacgcgctgtacgagcactgcgcggccgga
tacggggagatcgaggtctgggcggacgagccggaaccggacgaggagaaccccgcactc
cgggaacaggaggcggagcaggcctggcccctcccgctggacgagcgcgccctggcccgc
cgccgggccgcccgcgacacggtgctggcccacctggaggcactgtcggccgccccggca
cccggcgcgtacgggacaccggaccggccggcggcccggcggccaccgcacgacgccgcc
ctgccgcacgacggggagccgcctctgtacgacgaggagccgccctacgacgaggaggag
cctccgccctacgacgaggaacccccgtacggcgaacctgtgtacgacgaacctccgtac
gacggactgccgggcgacggactgccgggtcacgtggagccgctccgcgacgaggagccg
tcccacggagagggtgagccccacggagagggtgagccccacggcggggggaccccgtac
ggccacgacgcgcccgcgggcggtcccgcacgcccgcgcgtgcccgccgcccgggcgccc
gtcgaggaggcgggagccctcaccgcggggacggccgccgcgccggacggggcgggactc
ccgtcggacgggccggacctcaccccggaggagctgcggaccctcgcctcctgggaccgt
gacctcgacgccctcgccggtgagctgcgccgcgcccgcgcggccgtgcacgacgtcgtc
gtacccgcctcgctctccgccacccagctgctgcacctcgccgacgaccccgacggcttc
gcgcgcgagctggcccgccccatgcccaagccgccgcagcccgcggcccgccgggggacc
cgcttccacgcctgggtggaatcccggttcgaggagctgccgctgcccatgctcggcccg
gacgagctgcccgggggcgacgacacggagatcgccgacgaacgcgacctcgccgagctc
aaggaggccttcgagcgcacggcgtacgcccggcgcactccctatcgggtggaaaccccg
ttccagatcatcctcgcgggccgggtgatccgcggccgtatcgacgcggtgtaccgcacc
ggggacacctacgagatcgtcgactggaagaccacccggcaccgcacggccgacccgctc
cagctcgccgtctaccgcctggcctgggccgaactccaccacctggacccggaggcggtc
accgcgaccttcctctacgtacgcaccggcgagaccgtccgcccggcccggctgccgggg
cgggcggagctggagaggctcctgctggacgagccacctccgcggggccgatag
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