Streptomyces nitrosporeus: CP967_12130
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Entry
CP967_12130 CDS
T06889
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
snk
Streptomyces nitrosporeus
Pathway
snk00040
Pentose and glucuronate interconversions
snk01100
Metabolic pathways
snk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
snk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CP967_12130
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CP967_12130
Enzymes [BR:
snk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CP967_12130
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GFIT
Motif
Pfam:
RicinB_lectin_2
Ricin_B_lectin
Pectate_lyase_4
CDtoxinA
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QEU72641
UniProt:
A0A5J6F8R2
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All DBs
Position
complement(2775143..2776618)
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AA seq
491 aa
AA seq
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MRARSQHRNKRKTLRLGALLTALLLAVGGVLAGGLASPAGAVVSPGAGGVYQLVVKKSGM
CVDVPGASSANGALLQQWGCTEGAAWQQFTLQADGSDRYRLVSRSSGKCVDVPAGSKESG
VRLQQWGCGSGQANQQWTLSPSGTGTYQVVNVNSGLCMSDKGASTASGAAIIQETCTHNS
NKQWAFNPVGGGRVWSDKADGFASTGGGTTGGAAGTTVTVKNYADLVTYATASAPYVIKV
AAAITVTPYGHEIPVKSDKTIIGVGTSGQIVGGGFFLGTGVHNVIIRNLTIRDTLMTEDD
PDDKDYDYDGIQMDTADHIWIDHNRIERMNDGLIDSRKDTSYLTVSWNVLGEQNKAFGIG
WTDNVTARMTIHHNWIHDTGQRNPSIDNVAYAHLYNNYMQNVSSYGNLSRGASKTVIENS
YYQNVANPYYNDTSAASLTQTGSICVSCTGKQQTNGTTFKPSDHYGYTLDPAADVPALLK
QYAGPQANIGG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcacggtcacagcacaggaacaagcggaaaaccctgagactcggagccctgctg
acggccctgctcctggccgtcggcggagtgctcgccggtggtctggcctctcccgccggg
gcggtggtgtcgccgggggcgggtggggtgtatcagctggtggtgaagaagagcgggatg
tgtgtggacgtccctggggcgtcgtcggcgaacggtgctcttcttcagcagtgggggtgt
acggagggtgcggcgtggcagcagttcacgttgcaggccgacgggtcggacaggtaccgg
ctggtgagccggagcagtggtaagtgtgtggatgttccggctggttcgaaggagagcggg
gtgcggctccagcagtggggctgtggttccggtcaggccaaccagcagtggacgctgtca
ccgagtggtacgggcacgtatcaggtggtcaacgtcaacagcggtctgtgcatgagtgac
aagggtgcgtccacggccagtggtgcggcgatcatccaggagacctgcacccacaacagc
aacaagcagtgggccttcaaccccgtcggcggcggacgcgtctggtccgacaaggccgac
ggcttcgcctccaccggcggcggtaccaccggcggtgcggccggcacgaccgtcaccgtc
aagaactacgcggatctggtgacgtacgccaccgcctccgcgccgtacgtcatcaaggtc
gccgccgcgatcaccgtcaccccgtacggacacgagatccccgtgaagtccgacaagacg
atcatcggcgtcggaacctccgggcagatcgtcggcggcggcttcttcctcggtaccggc
gtccacaacgtcatcatccgcaacctcaccatccgcgacaccctgatgaccgaggacgac
ccggacgacaaggactacgactacgacggcatccagatggacaccgccgaccacatctgg
atcgaccacaaccgcatcgagcggatgaacgacgggctcatcgacagccggaaggacacc
agctacctgaccgtctcctggaacgtcctgggcgagcagaacaaggccttcggcatcggc
tggacggacaacgtgaccgccaggatgaccatccaccacaactggatccacgacaccggc
cagcgcaaccccagcatcgacaacgtggcctatgcccacctctacaacaactacatgcag
aacgtgtcctcgtacggcaacctctcgcgcggtgcctcgaagaccgtcatcgagaacagc
tactaccagaacgtcgccaacccctactacaacgacacctcggcggcgtcgctgacccag
accggcagcatctgcgtctcctgcaccggcaagcagcagaccaacggcacgacgttcaag
ccgtcggaccactacggctacaccctggacccggccgccgacgtccccgccctgctgaag
cagtacgccggcccgcaggcgaacatcggcggctga
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