Streptomyces nitrosporeus: CP967_16465
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Entry
CP967_16465 CDS
T06889
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
snk
Streptomyces nitrosporeus
Brite
KEGG Orthology (KO) [BR:
snk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snk03021
]
CP967_16465
Transcription machinery [BR:
snk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP967_16465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
HTH_24
Sigma70_ECF
MarR
HTH_31
DUF7343
Motif
Other DBs
NCBI-ProteinID:
QEU73371
UniProt:
A0A5J6FB63
LinkDB
All DBs
Position
3680856..3681719
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AA seq
287 aa
AA seq
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MSADQGSSKVLTLTKSVPAPAVLTSSSEAIDTRTLSRSLFLRLAALGPCGPDGRESPERA
YVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMP
TVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDELAQKLDRSPTVPELAKALGVSEED
VVDGLAVGNAYTASSLDSPSPEDDGGEGSLADRLGYEDAALEGVEYRESLKPLLAKLPPR
ERQIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLTQLREGLIAD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaccagggcagctcgaaggtgctcacgctcacgaagagcgtgccggcaccc
gccgtgctcaccagctcgtcggaagccatcgacacccgcacgctgtcccgctccctgttc
ctgcggctcgccgcactgggcccctgcggcccggacgggagggaaagcccggagcgggcg
tacgtgcgggacacgctcatcgaactcaacctccctctcgtgcggtacgcggcggcacgt
ttccgcagccgcaacgaaccgatggaggacatcgtccaggtcggcacgatcggcctgatc
aaggcgatcgaccgcttcgactgcgagcggggggtggagttccccaccttcgcgatgccg
acggtcgtgggggagatcaagcgtttcttccgcgacacctcgtggtcggtgcgggtgccg
cgccggctccaggagctccggctcgcgctcaccaaggcgagtgacgagctcgcccagaag
ctggaccggtcgccgacggtcccggagctggccaaggcgctcggggtgtccgaggaggac
gtggtcgacggtctggccgtcggcaacgcctacacggcctcctcgctggactccccgtcc
cccgaggacgacggcggcgagggctccctggcggaccgcctggggtacgaggacgccgcg
ctggagggtgtcgagtaccgcgagtcgctgaagccgctgctggccaagctgccgccccgg
gagcggcagatcatcatgctgcgcttcttcgccaacatgacccagtcgcagatcggcgag
gaggtcggcatctcgcagatgcacgtctcacggctgctgacccggaccctcacccagctc
agggaagggctcatcgccgactga
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