Streptomyces nitrosporeus: CP967_22220
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Entry
CP967_22220 CDS
T06889
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
snk
Streptomyces nitrosporeus
Pathway
snk03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
snk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CP967_22220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snk03019
]
CP967_22220
03009 Ribosome biogenesis [BR:
snk03009
]
CP967_22220
Messenger RNA biogenesis [BR:
snk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CP967_22220
Ribosome biogenesis [BR:
snk03009
]
Eukaryotic type
Pre-60S particles
RNases
CP967_22220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QEU76690
UniProt:
A0A5J6FPB7
LinkDB
All DBs
Position
complement(4996482..4997087)
Genome browser
AA seq
201 aa
AA seq
DB search
MNDRMVWIDCEMTGLSLTDDALIEVAALVTDSELNVLGDGVDIVIRPPDASLETMPEVVR
QMHTASGLLDELAGGTTLADAEEQVLAYVREHVKEPGKAPLCGNSVGTDRGFLSRDMPSL
EGYLHYRIVDVSSVKELARRWYPRAYFNSPDKNGNHRALADIRDSITELRYYREAVFVPQ
PGPDSARAKEIAARVSRPSGK
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccgcatggtgtggatcgactgcgagatgaccgggctctcgctgacggacgac
gcactcatcgaggtggccgcactggtcaccgactcggaactgaacgtgctcggtgacggg
gtggacatcgtgatccgcccgccggacgcgtccctggagaccatgcccgaggtggtgcgg
cagatgcacaccgcctcgggcctcctcgacgagctcgccgggggcacgaccctggcggac
gccgaggagcaggtcctggcgtatgtgcgcgagcacgtgaaggagccgggcaaggccccg
ctgtgcgggaactcggtcggcaccgaccgcggcttcctgtcgcgggacatgccgtcgctg
gaggggtacctccactaccggatcgtcgatgtgtcctcggtcaaggagctggcgcgccgc
tggtacccgagggcgtacttcaacagtccggacaagaacggcaaccaccgggccctcgcg
gacatccgtgactccatcacggagctgcggtactaccgggaggcggtcttcgtcccgcag
cccggcccggactcggcccgcgccaaggagatcgcggcacgcgtgtcgcggccttccggg
aagtag
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