Streptomyces nitrosporeus: CP967_23245
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Entry
CP967_23245 CDS
T06889
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
snk
Streptomyces nitrosporeus
Pathway
snk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP967_23245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snk03019
]
CP967_23245
03009 Ribosome biogenesis [BR:
snk03009
]
CP967_23245
Enzymes [BR:
snk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CP967_23245
Messenger RNA biogenesis [BR:
snk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CP967_23245
Ribosome biogenesis [BR:
snk03009
]
Prokaryotic type
rRNA processing factors
CP967_23245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
HC2
Motif
Other DBs
NCBI-ProteinID:
QEU74516
UniProt:
A0A5J6FET9
LinkDB
All DBs
Position
5244717..5249171
Genome browser
AA seq
1484 aa
AA seq
DB search
MHEPNEPGATGNTEENNAPGDKLPPRRRRRAASRPAGPPSGGPGASAPVDATPAIPAGSD
AEAPFAAEAAATEAGDAAPPARPRRRAVRKATAPAGAPRSGGTAEAGPTETAAESVEPAV
AAGSAPADETAGTAEAAPPARPRRRAVRKATAPAGAPEAAEQIAEPAVAEEPEELEEAEE
AVEAEAVEPEPVESEPVAAPRGRRRVVRKATAPAGPPQPVGSAGEPAADESAPAAEPAAA
AEPAPVAEPAAAPRGRGRRRASAPAGTPQTAGTAVPEPEAVEPAAVEAPAAQAPAEEAAP
AEPAAAAPRRRRATRKASAPAGAPQPTGPAAPAEELAEASAAGTGESLPAAVAEELAAET
AGTTEEAAPRGRQRRRATAPAGRPEFTGRAEEPERRSRRATRPAVAVFQAPVFAEPMFQT
PETAAAAAAAAGPASPYDEEDEHEERQTEERTPRRDTGRQRTAAETAPGTEETEAAPQSG
SRRRRRRRGEAVETEPAATPVTLPAEETPEDEHEEDRADTGAEHEGEGDEADEYGDRPSR
RRRRGGRRRRRGEAGDPEDTEQHDEPVSGAAEASDEERQDRDDEEEDDESGPSGSSSSRR
RRRRRRRSSDAASEEAATGSDDPERTVVKVREPRKKEAEREPGTGFDEVRSIKGSTRMEA
KKQRRREGREQGRRRVPIITEAEFLARREAVERVMVVRQSGERTQIGVLEDNVLVEHYVN
KEQATSYVGNVYLGKVQNVLPSMEAAFVDIGKGRNAVLYAGEVNFEALGMAHGPRRIESA
LKSGQSVLVQVTKDPIGHKGARLTSQVSLPGRYLVYVPEGSMTGISRKLPDTERARLKTI
LKKIVPEDAGVIVRTAAEGASEEELRRDVERLQGQWEEIQKKSKSTTSSNAPTLLYGEPD
MTVRVVRDIFNEDFSKVIVSGDDAWETIHGYVSQVAPDLVDRLSRWTSEVDVFATYRIDE
QLMKALDRKVYLPSGGSLVIDKTEAMVVVDVNTGKFTGQGGNLEETVTKNNLEAAEEIVR
QLRLRDLGGIVVVDFIDMVLESNRDLVLRRLLECLGRDRTKHQVAEVTSLGLVQMTRKRV
GQGLLESFSETCVHCNGRGVIVHMEQPASTGGGGGKKSKKRGRGGAGHDHEHEHADRHEQ
EHAAAHDGHEEPAETEAEVAAEAAAPVALPEPEFGADEELYSSPAEAEAAARGRGRRRGG
RKATAPAGAPQTAPAPAPVAEPVAASEARPEPAVEPATAEAPEPAAPEPAAPSEPAPGDG
AEAPAEAAPPARTRRRATRKATAPAGSPKQADVPQPVQPVSPAAEPVAAEDPVAPAAEPP
ARPQDEASVQETAPEAPAAEEEAAPVAAPPRARRRVTRKVTAPAGSPAGAGEAEVVVVTG
APAAGTSEAAPVAEDGGEAAPAPAKKTVRKTAKKAPAKKATAKKTAAKTTAAKTTAAKST
AAKKTTAKKATTKKATTKKTTAKKTVAAEQSSPSVTASAPPEEG
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgcacgagccgaacgaacccggtgcgaccgggaacaccgaagagaacaacgcccccggg
gacaagctgccgccgcgccgcaggcgccgcgccgcctcccggcccgcgggtccgccctcg
ggcggaccgggcgcgtccgccccggtggacgccacgccggccataccggcggggtccgac
gccgaagcgccctttgccgccgaggccgctgccaccgaggccggcgacgccgcgccgccg
gcgcgtccgcgccgccgcgcggtgcgcaaggcgaccgccccggcgggcgccccccggagt
ggcgggaccgctgaggccgggccgaccgagacggccgcggagagcgtggagccggcggtg
gccgccggtagcgccccggccgacgagacggccggaacggccgaggccgcgccccccgcc
cggccgcgccgccgggcggtgcgcaaggcgaccgcccccgccggtgcgcccgaggccgcc
gagcagatcgccgagccggccgtggccgaggagccggaagagctggaagaggccgaggaa
gccgtggaggccgaggccgtggagcccgagcctgtggagtccgagcctgtggcggccccc
cgtggccgtcgtcgcgtcgtccgtaaggcgaccgcaccggccggccccccgcagcccgtc
ggatccgccggggagcccgccgcagacgaatctgcccccgctgccgaacccgccgccgct
gccgaacccgcccccgtggcggagccggccgccgcgccgcgcggccgtggacggcggcgc
gcctccgctccggccggtacgccgcagaccgccgggacggccgttccggagcccgaggcc
gtggagcccgcggctgtggaggccccggccgcgcaggccccggccgaagaagccgccccc
gcggaaccggccgccgcggccccccgccgtcgtcgtgccacccgcaaggcgagcgccccc
gcaggagccccgcagcccaccgggcccgccgccccggccgaggaactcgccgaggcgtcg
gccgccggcaccggtgagagccttcccgccgctgtggcggaggaactggccgccgagacc
gccgggaccaccgaggaagcagcgccgcgcggccgccagcgccgtcgtgccaccgctccc
gcgggccggcccgagttcaccggcagggccgaggagccggaacgccgcagccgtcgcgcc
acgcgccccgccgtcgccgtcttccaggccccggtcttcgccgagccgatgttccagacc
ccggagaccgcggccgccgcggcagccgcggccggtcccgcctcgccgtacgacgaggag
gacgagcacgaggagcggcagacggaggagcggaccccgcgcagggacaccggccggcag
cggaccgccgccgagaccgccccgggcaccgaggagaccgaggcggcgccgcagagcggt
tcgcgccgtcgccgtcgccgccgcggtgaggccgtcgagaccgagccggccgcgacaccc
gtcacgctgcccgccgaggagacccccgaggacgagcacgaggaggaccgggccgacacc
ggcgccgagcacgagggcgagggtgacgaggccgacgagtacggcgaccggccctcccgc
cgtcgccgccgcggtggccgccgccgccgtcgtggcgaggccggtgacccggaggacacc
gagcagcacgacgaacccgtgagcggggccgccgaggcatccgacgaggagcggcaggac
cgggacgacgaggaggaggacgacgagtccggcccctccggctccagcagcagccgccgt
cgccgtcgccgtcgccgccgcagctcggacgccgcgtccgaggaggcggccacgggctcg
gacgacccggagcgtacggtcgtcaaggtccgggagccgcgcaagaaggaggcggagcgc
gagccgggtaccggcttcgacgaggtccggtccatcaagggctcgacccgtatggaggcc
aagaagcagcgccgccgcgaagggcgcgagcagggccgccgccgtgtgccgatcatcacc
gaggccgagttcctggcccgccgcgaggcggtcgagcgggtcatggtcgtccgccagagc
ggcgagcgcacccagatcggcgtcctcgaggacaacgtgctcgtcgagcactacgtcaac
aaggagcaggccaccagctacgtcggcaacgtctacctgggcaaggtgcagaacgtcctg
ccgtccatggaggcggcgttcgtcgacatcggcaaggggcgcaacgccgtcctgtacgcc
ggtgaggtcaacttcgaggcgctcggcatggcccacgggccgcgccgcatcgagagcgcg
ctgaagtccggccagtcggtcctcgtccaggtgaccaaggacccgatcggccacaagggc
gcccggctgaccagccaggtctcgctgcccggccgctacctggtctatgtgcccgagggc
tcgatgaccggtatcagccgcaagctgcccgacaccgagcgcgcccggctgaagaccatc
ctcaagaagatcgttcccgaggacgcgggtgtcatcgtgcgcaccgccgccgagggcgcg
agcgaggaggagctgcgccgcgacgtcgagcggctgcagggccagtgggaagagatccag
aagaagtcgaagagcaccaccagctccaacgcgccgaccctgctgtacggcgagccggac
atgacggtgcgggtcgtccgcgacatcttcaacgaggacttctcgaaggtgatcgtcagc
ggtgacgacgcgtgggagaccatccacggatatgtctcgcaggtggcgccggacctcgtg
gaccggctgtcgcggtggacgtccgaggtcgacgtcttcgcgacgtaccggatcgacgag
cagctgatgaaggcgctggaccggaaggtctacctgcccagcggcggctcgctggtgatc
gacaagaccgaggcgatggtcgtcgtcgacgtcaacaccggaaagttcaccgggcagggc
gggaacctcgaggagaccgtcaccaagaacaacctggaggcggccgaggagatcgtgcgc
cagctgcggctgcgcgacctcggcggcatcgtggtcgtcgacttcatcgacatggtcctg
gagtccaaccgggacctcgtcctgcggcggctgctggaatgcctgggccgggaccgcacc
aagcaccaggtcgccgaggtcacctcgctgggcctggtccagatgacccgtaagcgcgtg
gggcagggtctgctggagtccttctccgagacctgcgtccactgcaacggacgcggtgtc
atcgtgcacatggagcagccggcgtccacgggcggcgggggcggcaagaagtccaagaag
cgcggccggggcggcgccgggcacgaccacgagcacgagcacgccgaccgccacgagcag
gagcacgccgccgcgcacgacgggcacgaggagcccgccgagacggaggccgaggtggcg
gccgaggcagccgccccggtggcgctgcccgagccggagttcggcgcggacgaggagctg
tacagcagcccggccgaggccgaggcggcggcccgtggccgcggacgtcggcgtggcggc
cgcaaggcgacggccccggccggtgccccgcagaccgcaccggcaccggcaccggtggcc
gagcccgtcgcggcgtccgaggcacggcccgagccggccgtggaaccggcgacggcggag
gcaccggaaccggcggccccggaaccggcggcaccgtccgagccggcaccgggtgacgga
gccgaggccccggccgaggcagcgcccccggcccggacgcggcgcagggcgacccgtaag
gcgaccgctccggcgggctcgcccaagcaggccgacgtgccgcagccggtccagccggtc
tcgcccgcggcggagcccgtcgcggccgaggacccggtcgctccggcggccgagccgcct
gcccgtccgcaggacgaggcatccgtccaggagaccgcgcccgaggctccggccgccgag
gaggaggccgcaccggtcgccgccccgccgcgcgcacggcgccgggtgacccgcaaggtc
accgccccggcgggttcgcccgccggcgccggggaggccgaggtcgtcgtggtgacgggt
gcgcccgccgccggtacctccgaggccgccccggtggcggaggacgggggggaggcagcc
ccggccccggccaagaagacggtccgcaagaccgccaagaaggccccggccaagaaggcg
accgcgaagaagacggccgccaagaccacggcggccaagacgacggccgccaagtccaca
gccgcgaagaagacgacggcgaagaaggccacgacgaagaaggccacgacgaagaagacg
acggcgaagaagaccgtcgccgccgagcagtcgtcgccctccgtgaccgcctcggccccg
cccgaggagggctga
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