Streptomyces nitrosporeus: CP967_26835
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Entry
CP967_26835 CDS
T06889
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
snk
Streptomyces nitrosporeus
Pathway
snk00040
Pentose and glucuronate interconversions
snk01100
Metabolic pathways
snk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
snk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CP967_26835
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CP967_26835
Enzymes [BR:
snk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CP967_26835
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Motif
Pfam:
Pectate_lyase_4
DUF6223
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QEU75118
UniProt:
A0A5J6FF98
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Position
6058498..6059841
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AA seq
447 aa
AA seq
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MPARMRNVRAIAVVMGCASLALAVSVPAQAAHGHGHGNGHKGIERAVLPEGDGWAAAEGS
TTGGANATPDHVYTVTNRAELIAAFRDAGDAPKIVRIAGTVHGNSDANGTPIGCEDYQQD
GYTLEKYLAAYDPAVWGTEEVPSGPLEDARAASAKLQAAAVNVNVPSNTTLVGVGENPTV
IGASLQVKGVSNVIIRNINFEDTYDCFPQWDPTDGDNGAWNSEYDNLVVYGSDHVWVDHN
TFSDGDRPDAGQPYYFGQVYQQHDGLFDIVRGADLVTVSWNVLKDHDKTMLIGNSDKAGD
TDRGKLRVTLHHNLFKDVKERAPRVRFGQVDSYNNHFVATRGAAYGYTYGIGAESHLVAE
HNAFTVPKGFDKATILKKWSESSLTAGGNYVNGRKTDLIAVHNAGVPTEHLTEGAGWTPT
LRTKVNHPLVVPVLVGLKAGAGKARAN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcacgcatgcgaaacgtccgcgccatcgccgtggtgatgggctgtgcctcgctc
gccctcgccgtgagcgtccccgcccaggccgcccacggccacggccacggcaacggccac
aaggggatcgagcgcgccgtcctccccgagggcgacggctgggccgccgccgagggctcc
accaccggtggcgcgaacgccaccccggaccacgtctacacggtcaccaaccgcgccgag
ctgatcgccgcgttccgggacgccggcgacgcccccaagatcgtcaggatcgcgggcacc
gtccacggcaactccgacgccaacggcaccccgatcggctgcgaggactaccagcaggac
ggttacaccctggagaagtacctcgccgcctacgacccggcggtctggggcaccgaggag
gtgccctccggcccgctggaggacgcccgcgcggcgtccgcgaagctccaggcggccgcc
gtcaacgtcaacgtcccgtccaacaccacgctcgtcggcgtcggcgagaacccgacggtc
atcggcgcgagcctccaggtgaagggcgtctccaacgtcatcatccgcaacatcaacttc
gaggacacctacgactgcttcccccagtgggaccccaccgacggtgacaacggcgcctgg
aactccgagtacgacaacctcgtcgtctacggctccgaccacgtctgggtcgaccacaac
accttcagcgacggcgaccgtcccgacgccggccagccgtactacttcggccaggtctac
cagcagcacgacggcctcttcgacatcgtccgcggcgccgacctggtcaccgtctcctgg
aacgtcctcaaggaccacgacaagaccatgctcatcggcaacagcgacaaggccggtgac
accgaccggggcaagctccgcgtcacgctgcaccacaacctcttcaaggacgtgaaggag
cgcgcgccccgcgtccgcttcggccaggtcgactcgtacaacaaccacttcgtcgccacc
aggggtgccgcctacggctacacctacggcatcggcgccgaatcgcacctggtcgccgag
cacaacgcgttcaccgtgcccaagggcttcgacaaggccaccatcctcaagaagtggtcg
gagtcctccctcaccgcgggcggcaactacgtcaacggccgcaagaccgacctgatagcc
gtgcacaacgcgggcgtccccaccgagcacctcaccgagggcgccggctggaccccgacg
ctccgcaccaaggtcaaccacccgctcgtcgtccccgtactcgtgggtctgaaggccggc
gccggcaaggcgcgcgccaactga
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