Streptomyces nitrosporeus: CP967_28270
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Entry
CP967_28270 CDS
T06889
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
snk
Streptomyces nitrosporeus
Brite
KEGG Orthology (KO) [BR:
snk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snk03019
]
CP967_28270
Enzymes [BR:
snk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CP967_28270
Messenger RNA biogenesis [BR:
snk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CP967_28270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QEU75355
UniProt:
A0A5J6FK42
LinkDB
All DBs
Position
6374999..6377830
Genome browser
AA seq
943 aa
AA seq
DB search
MTEDLSPAERYQASRVRAAEAATALGPFRDLYDFPLDPFQIEACKALEAGKGVLVAAPTG
SGKTIVGEFAVHLALEQGRKCFYTTPIKALSNQKFTDLVKRYGADRVGLLTGDNSVNADA
PVVVMTTEVLRNMLYAGSQALTGLGHVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSL
SATVSNAEEFGDWLDTVRGDTQVIVSEHRPVPLWQHVMAGRRVYDLFEEETDHGGRGTGR
REVNPDLLRLARMENQRTYNPRDRRRGKMVREADRERERRQRGRIWTPARPEVIDRLDAE
GLLPAITFIFSRAGCEAAVQQCLAAGLRLNDEDKRRLVREIVEERTASIPAEDLHVLGYY
EWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLV
KWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRGMDPGALAGLAGTRTYPLRSS
FRPSYNMAVNLVQQFGRHRSRELLETSFAQFQADRSVVGISRQVQRNEEGLEGYKEGMTC
HLGDFEEYARLRRDLKDRETELAKQGAAQRRAAAAASLEKLKPGDVIHVPTGKFAGLALV
LDPGVPAGRANGHRGLEHHDGPRPLVLTAERQVKRLAQIDFPVPVEALERMRVPKSFNPR
SPQSRRDLASALRSKAGHIDPGRHRKQRAAAADDREIARLRTELRAHPCHGCDEREDHAR
WAERYHRLQRDTRQLEKRIEGRTNTIARTFDRIVALLTELDYLRGNEVTGNGRRLARLYG
ELDLLASECIRDGVWEGLNPAELAACVSALVYEARQADDAVAPKLPSGPAKVALGEMVRI
WGRLDALEEDFKISQSEGVGQREPDLGFAWAVYMWASGRTLDEVLREAEMPAGDFVRWCK
QVIDVLGQIAAAAPREGGSTVPKAAHKAVDAVLRGVVAYSSVG
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggacctctcaccagctgagcgataccaggcgtcccgggtccgtgcggccgaa
gcggccacggctctcggccccttccgcgacctgtacgacttccccctggacccgttccag
atcgaggcgtgcaaggcgctggaggcgggcaagggggtgctggtcgccgccccgaccggg
tcgggcaagacgatcgtcggcgagttcgccgtgcacctggccctggagcagggccgcaag
tgcttctacaccacccccatcaaggccctgtccaaccagaagttcaccgatctggtgaag
cggtacggcgcggaccgggtcggccttctgaccggtgacaacagcgtcaacgcggacgcg
cccgtggtcgtcatgaccaccgaggtgctgcggaacatgctgtacgcgggctcccaggcc
ctcaccggtctcggccatgtcgtgatggacgaggtgcactacctctccgaccgcttccgc
ggcgccgtgtgggaggaagtgatcatccacctgccggagtcggtgaccctggtgtcactg
tcggcgaccgtgtccaacgccgaggagttcggcgactggctggacaccgtgcgcggcgac
acccaggtgatcgtctccgagcaccggccggtgccgctgtggcagcacgtcatggccggc
cgccgggtgtacgacctcttcgaggaggagaccgaccacggcggccggggcaccggccgg
cgcgaggtcaaccccgatctgctccggctcgcccggatggagaaccagcgcacctacaac
ccgcgcgaccgccgccgcggcaagatggtccgcgaggcggaccgcgagcgcgagcggcgc
cagcgcggccgtatctggaccccggcccggcccgaggtcatcgaccggctcgacgccgag
gggctgctgcccgccatcaccttcatcttcagccgggccggctgcgaggcggccgtccag
cagtgcctggcggccggactgcggctcaacgacgaggacaagcgccgcctggtgcgggag
atcgtcgaggagcggaccgcgtcgatccccgccgaggacctccacgtcctcggctactac
gagtggctcgaagggctggagcggggcatcgccgcgcaccacgcgggcatgctgccgacc
ttcaaggaggtcgtcgaggagctgttcgtccgcggtctggtcaaggcggtcttcgcgacc
gagaccctggcgctcggcatcaacatgccggcccgctcggtggtgctggagaagctggtc
aagtggaacggcgagcagcacgccgacatcactcccggcgagtacacccagctgaccggc
cgggcgggccgccgcggcatcgacgtcgagggccatgcggtcgtcctgtggcagcggggc
atggacccgggcgccctcgccggcctcgcgggcacccgtacctacccgctgcggtccagt
ttccggccctcgtacaacatggccgtcaacctggtgcagcagttcgggcggcaccgctcg
cgtgaactgctggagacgtccttcgcgcagttccaggccgaccggtccgtcgtcggcatc
tcccgccaggtccagcgcaacgaggagggcctggagggctacaaggagggaatgacctgc
cacctcggggacttcgaggagtacgcgcggctgcgccgcgacctcaaggaccgcgagacg
gagctggccaagcagggcgccgcccagcggcgggccgccgcggcggcgtccctggagaag
ctgaagcccggtgacgtgatccatgtgcccaccggcaagttcgccgggctcgcgctggtc
ctggacccgggcgtccccgccggacgggccaacgggcaccggggcctggagcaccacgac
ggcccccgtccgctggtgctgaccgccgagcggcaggtgaagcggctcgcccagatcgac
ttcccggtgccggtggaggcgctggagcggatgcgggtgccgaagtccttcaacccgcgc
tccccccagtcgcgcagggacctggcctccgcgctgcgcagcaaggccgggcacatcgac
ccgggccggcaccgcaagcagcgggccgcggcggccgacgaccgggagatcgcccggctg
cgcaccgaactgcgggcccacccctgccacggctgcgacgagcgcgaggaccacgcgcgc
tgggccgagcgctaccaccgcctccagcgggacacccgtcagctggagaagcgcatcgag
ggccggacgaacaccatcgcccggaccttcgaccggatcgtcgccctgctcaccgaactc
gactacctgcggggcaacgaggtcaccggcaacggccggcggctggcgcgcctgtacggc
gaactcgacctgctggcgagcgaatgcatccgggacggggtctgggaggggctgaacccg
gccgaactggcggcgtgcgtctcggcgctggtctacgaggcccgccaggcggacgacgcg
gtggcacccaagctgccgtccgggccggccaaggtggcgctgggcgagatggtccgcatc
tggggcaggctcgacgccctggaggaggacttcaagatcagtcagtccgagggcgtcggc
cagcgtgagcccgacctcggattcgcctgggccgtctacatgtgggcctccggccggacg
ctggacgaggtgctccgcgaggcggagatgccggccggtgacttcgtacggtggtgcaag
caggtcatcgacgtgctcggccagatcgcggccgccgcaccgcgcgagggcggctcgacg
gtgccgaaggccgcccacaaggcggtggacgcggtgctgcggggtgtggtcgcgtacagc
tcggtgggctga
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