Staphylococcus nepalensis: BJD96_03770
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Entry
BJD96_03770 CDS
T05272
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
snl
Staphylococcus nepalensis
Pathway
snl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
snl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BJD96_03770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snl03021
]
BJD96_03770
03400 DNA repair and recombination proteins [BR:
snl03400
]
BJD96_03770
Enzymes [BR:
snl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BJD96_03770
Transcription machinery [BR:
snl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BJD96_03770
DNA repair and recombination proteins [BR:
snl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BJD96_03770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF961
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
ATH59522
LinkDB
All DBs
Position
848339..849283
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPRIETIEISEDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKYIEIEG
VLHEFSAIDNVVEDVSTIIMNIKKLALKIYSEEDKTLEIDVKDEGEVTASDITHDSDVEI
LNPEIKIATVSKGGHLKIRLVANKGRGYALAEQNNTSDLPIGVIPVDSLYSPVERVNYTV
ENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKILTEHLNIFVGLTDEAQNAEIMIEK
EEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVK
YKLEDLGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaatcgaaaaacctagaattgaaacaattgaaattagtgaagatgctaaattc
ggtaagttcgttgttgaaccactagaacgtggctacggtactacactaggaaactcctta
cgtcgtatcctactatcttcattaccaggtgcagccgttaagtacatcgaaatcgaaggt
gtgttacatgaattctcagcaatagataatgttgtagaagatgtttcgacaattattatg
aacatcaaaaaactagcattaaaaatttattctgaagaagacaaaacattagaaattgat
gtaaaagatgaaggcgaagtaactgcaagtgacattactcatgatagtgatgtagagatt
ttaaatcctgagattaaaatcgcaacagtttctaaaggtggacatttaaaaatccgtctt
gttgctaataagggtagaggttacgcattagcagaacaaaataacactagtgatttacca
attggtgtaattccagtggattcactttattcaccagtagaacgtgttaactatacagta
gaaaatacacgtgtaggtcaaagtagtgattttgataaattaactttagatgtttggact
aacggttcaatcacgccacaagagtctgtttctctagcggcaaaaatcttaactgaacat
ttaaacatcttcgttggattgactgatgaagcacaaaatgctgaaatcatgattgaaaaa
gaagaagaccaaaaagaaaaagtacttgaaatgtctatcgaagaattggatttatctgta
cgttcatataactgcttaaaacgcgcgggtattaattctgttcaagaattagctgataaa
tctgaagctgacatgatgaaagtccgcaatttaggtcgtaaatcattagaagaagttaaa
tataaactcgaagatttaggtctaggtctaagaaaagaagattaa
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