Staphylococcus nepalensis: BJD96_04235
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Entry
BJD96_04235 CDS
T05272
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
snl
Staphylococcus nepalensis
Pathway
snl00260
Glycine, serine and threonine metabolism
snl00460
Cyanoamino acid metabolism
snl00630
Glyoxylate and dicarboxylate metabolism
snl00670
One carbon pool by folate
snl00680
Methane metabolism
snl01100
Metabolic pathways
snl01110
Biosynthesis of secondary metabolites
snl01120
Microbial metabolism in diverse environments
snl01200
Carbon metabolism
snl01230
Biosynthesis of amino acids
snl01240
Biosynthesis of cofactors
snl04981
Folate transport and metabolism
Module
snl_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
snl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BJD96_04235
09102 Energy metabolism
00680 Methane metabolism
BJD96_04235
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BJD96_04235
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BJD96_04235
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BJD96_04235
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BJD96_04235
Enzymes [BR:
snl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BJD96_04235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
ArabFuran-catal
OKR_DC_1
Poly_A_pol_cat
Motif
Other DBs
NCBI-ProteinID:
ATH59598
UniProt:
A0A291JJK3
LinkDB
All DBs
Position
941689..942927
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AA seq
412 aa
AA seq
DB search
MSFIEKQDKEIYEVIQNEFNRQNNNIELIASENFVSEAVMEAQGSVLTNKYAEGYPNRRY
YGGCEFVDVSETLAIERAKQLFGAEHVNVQPHSGSQANMAVYLVALEHGDTVLGMNLSHG
GHLTHGAPVNFSGQFYNFVEYGVDKDSEQIDYDEVLKVAKEHQPKLIVAGASAYSKTIDF
KRFREIADEVGAKLMVDMAHIAGLVAVGLHPSPVAYADFVTTTTHKTLRGPRGGMILCKE
EYKKQIDKTIFPGIQGGPLEHVIAAKAVAFGEALQDDFKTYQQQVVKNAKVLADTLSQEG
FRVVSGGTDNHLVCVDVKGSVNITGKVAEETLDAIGITCNKNTIPFDQEKPFVTSGLRLG
TPAATTRGFDEQAFEEVAKIISLVLKDPENETTLKEGQERVKALTTKHPLYN
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttattgaaaagcaagataaagaaatatatgaagtaattcaaaatgagtttaac
cgtcaaaataataatatagagttaatcgcttctgaaaattttgtatcagaagcagtgatg
gaagctcaaggctcagtattaacaaataagtatgctgaaggctatcctaacagaagatat
tatggtggttgtgaatttgttgatgtgtctgaaacattagctatcgaacgagctaaacaa
ttatttggtgctgaacatgtcaatgtccaaccacactctggttctcaagcaaatatggct
gtttatctcgtagcattagaacatggtgatactgtattaggtatgaatttaagtcatggt
ggccacttaacgcatggcgcaccagtaaattttagtggacaattttacaactttgttgaa
tatggtgtcgataaagatagcgaacaaatagactacgatgaagttttaaaagtggctaaa
gaacatcaacctaaattgattgttgctggcgcatctgcatactcaaaaacgattgatttc
aaacgttttagagaaatagctgatgaagtcggagctaaattgatggtagatatggcacat
atcgctggattagtagctgttggtttacatccaagccctgtagcatacgctgattttgta
actacaacaacgcataaaacattgcgcggccctcgtggtggaatgattttatgtaaagaa
gaatacaaaaagcaaattgataaaaccattttccctggtattcaaggtggacctttagag
catgttattgctgcaaaagcagtagcatttggtgaggctttgcaagacgatttcaaaact
taccaacaacaagttgtaaaaaacgctaaagtattagctgacactttaagccaagaagga
tttagagtcgtatcaggtggtaccgataatcatctagtatgtgtagatgtaaaaggatct
gtaaatataacaggtaaagtagcagaagaaacacttgatgcaattggcataacttgtaat
aaaaatacaattccatttgatcaggaaaaaccttttgtaactagtggtttacgccttggt
actccagcggcgactacgcgaggttttgacgaacaagcatttgaagaagtagcgaaaatc
attagtttagtattaaaagatcctgaaaatgaaacaacattaaaagaaggacaagaaaga
gttaaagcattaactactaaacatcctttatacaattaa
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