Staphylococcus nepalensis: BJD96_04850
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Entry
BJD96_04850 CDS
T05272
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
snl
Staphylococcus nepalensis
Pathway
snl03420
Nucleotide excision repair
snl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
snl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJD96_04850
03430 Mismatch repair
BJD96_04850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snl03400
]
BJD96_04850
Enzymes [BR:
snl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJD96_04850
DNA repair and recombination proteins [BR:
snl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJD96_04850
MMR (mismatch excision repair)
Other MMR factors
BJD96_04850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
GBS_Bsp-like
Motif
Other DBs
NCBI-ProteinID:
ATH59707
LinkDB
All DBs
Position
1062934..1065138
Genome browser
AA seq
734 aa
AA seq
DB search
MNALVNQMNDEQSLAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNVLAITF
TNKAAKEMKARVESLVGEPAQVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSV
IKDVLKQENIDSKKFEPRMFIGAISNLKNELKTPEDAQKEAETYHEQMVATVYKGYQRQL
SRNEALDFDDLIMVTIRLFERVPDVLEYYQNKFQYIHVDEYQDTNKAQYTLVNLLAAKFK
NLCVVGDSDQSIYGWRGADIQNILSFEEDYPEAKTIFLEQNYRSTKNILNAANEVIKNNS
ERKPKGLWTGNTSGDKIHYYEATTERDEAEYVVKEIMKHQRNGKKFKDMAILYRTNAQSR
VLEETFMKSNMPYTMVGGQKFYDRKEIKDLLSYLRIIANSNDDISLRRVINVPKRGIGPS
SVDKIQAYANQNDISMFDALAEVDFIGLSKKVTQECITFYDTIQNLIKQQEFLEITEIVE
EVLVKSGYRDMLEREKTLESRSRLENIDEFMSVPKDYEENTPLEEQSLINFLTDLSLVAD
IDEAQIEDGITLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSDDDHEMQEERRICYVA
ITRAEQTLYLTHATSRMLFGRPQSNMASRFLQEIPEDLLENENKAAVKTQNNHFKSATKQ
PEKRSHSKRVASSKQSQQNTHWHVGDKVIHKSWGEGMVSNVNEKNGSVELDIIFKSEGPK
RLLAQFAPIEKKGE
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcattagtaaatcagatgaatgatgaacaaagcctagcggtacgaactacagaa
gggccacttcttattatggcaggtgctggttcaggcaaaacgcgtgtcttgactcatcgt
atagcttacttgcttgatgaaaaagacgtgtctccctataatgttctagcgattactttt
acaaacaaagcagcaaaagaaatgaaagcgcgtgttgaatctttagtgggtgagcctgcg
caagttatttggatgtccactttccactcaatgtgtgtaagaattcttagaagagacgca
gatagaattggtattgaacgtaattttacaattattgaccctactgatcaaaaatcagtt
attaaagacgttttaaagcaagaaaatatagatagcaaaaaatttgagccgagaatgttt
attggcgctataagtaatttgaaaaatgaattaaaaacaccggaagacgcacaaaaagaa
gctgagacatatcatgaacaaatggtcgctaccgtttataaaggttaccaacgacaatta
tcaagaaacgaagctttggattttgatgatttaataatggttacaattcgtttgtttgaa
cgtgtacctgatgtattagaatattatcaaaataaatttcaatacatacacgtagatgag
tatcaagatacaaataaagcacagtatacgctagtaaatcttttggcagctaaatttaaa
aatttatgtgtagtaggagattctgatcaatctatctatggatggcgtggcgcagatatt
caaaatatactgtcctttgaagaagattatcctgaagcaaaaacgatatttttagaacaa
aattaccgatcaactaaaaatatattaaatgcagcaaatgaagtaatcaaaaataactca
gagcgtaaacctaaagggttgtggactggcaacacatctggagataaaatccattactac
gaagctacgactgagagagatgaagcagaatatgtagtaaaagaaattatgaaacatcaa
cgcaacggcaaaaagtttaaggatatggcaattttgtatcgtacaaatgcacaatcacgt
gtgcttgaagaaacatttatgaaatctaatatgccttatacgatggtcggtggtcaaaaa
ttctacgatcgtaaagaaattaaagatttattaagctatttgagaataatagctaatagt
aatgatgatattagcttgcgtcgtgtaattaatgtacctaaacgtggtattggtccatct
tcagtagataaaattcaagcttatgcgaatcaaaatgatattagtatgtttgacgcttta
gcagaagtagattttatcggtttatctaaaaaggtaacacaagaatgtataactttttat
gacacgattcaaaatttgattaaacaacaagagtttttagagattactgaaattgttgaa
gaagtattagttaaatcaggttatcgagatatgttagaacgtgagaaaacactagaatca
agaagtagactagaaaatatagatgaatttatgtcggttcccaaagactatgaagaaaat
acaccactagaagaacagtcattgattaatttcttaaccgatttatctttagttgctgat
atagacgaagcgcaaatagaagatggcataacattgatgacaatgcactcagccaaagga
ttagaattcccaatcgtgtttattatggggatggaagagtcgttattccctcatatcaga
gcgataaaaagcgatgatgatcatgaaatgcaggaagaaagaagaatctgctatgtagcg
attacccgtgcagaacaaacattatatttaacgcatgctacttcaagaatgctttttggc
agaccacaatctaatatggcttcaaggttcttacaagaaatacctgaagatttattggaa
aatgaaaataaagcggcagttaaaacacaaaacaatcactttaaatcagcaaccaaacaa
cctgaaaaaagaagtcatagtaaacgtgttgcatcttctaagcaatcacaacaaaatacg
cattggcatgtcggtgataaagttatccataaatcttggggtgaaggtatggtaagtaat
gtaaatgaaaaaaatggctctgtagagttagatattatatttaaatcagaaggaccaaag
cgtctgcttgctcagtttgcacctatcgaaaagaaaggggaataa
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