Staphylococcus nepalensis: BJD96_06540
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Entry
BJD96_06540 CDS
T05272
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
snl
Staphylococcus nepalensis
Brite
KEGG Orthology (KO) [BR:
snl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BJD96_06540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snl03021
]
BJD96_06540
Transcription machinery [BR:
snl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BJD96_06540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
tify
Motif
Other DBs
NCBI-ProteinID:
ATH59977
UniProt:
A0A291JKQ5
LinkDB
All DBs
Position
1398957..1400063
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AA seq
368 aa
AA seq
DB search
MSGNKVTLKKQTIDPSLTLEDVKKRLIEKGKKEGHLSHEEIAEKLQNFEMDSDQMDELFD
QLTDNDISLVNEKDSSDKDSKLNPNDLSAPPGVKINDPVRMYLKEIGRVDLLNAQEEIEL
AKRIEQGDEVAKSRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFNKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPAPEEIG
EEMDLPPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEAQSPSDHAAYELLKEQL
EDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRS
KRLKDFMD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaataaagttacacttaaaaagcaaaccattgacccatctctaactttagaa
gatgtaaaaaaacgattaattgaaaaaggtaaaaaagaagggcatctaagccacgaagaa
attgcagagaaattacaaaatttcgagatggattctgatcaaatggatgaactatttgac
caattaactgataatgatatcagtttagtaaatgagaaagatagttcagataaagattcg
aagttgaaccctaatgatttaagtgcacctccaggtgttaaaattaatgaccctgtacgt
atgtatcttaaagaaattgggcgcgttgatttattaaacgcacaagaagaaattgaattg
gctaaaagaattgaacaaggtgatgaagttgctaagtctagattggcagaagcaaactta
cgtctagttgtaagtatagctaaaagatatgttggacgtggcatgcttttcttagattta
atccaagaaggtaatatgggattaattaaagcggtagaaaaattcgatttcaataaagga
tttaaattttcaacttacgcaacttggtggatacgtcaagcaatcacacgtgctatagct
gaccaagctcgtacgattcgtattccagtgcatatggtagaaacgatcaataaattaatt
cgtgtccaaagacaattattacaagatttaggacgtgatccagcaccagaagaaattggt
gaagaaatggatttaccacctgaaaaagtaagagaaatattaaaaatagctcaagagcct
gtttcattagaaaccccaattggcgaagaagacgatagtcatttaggtgattttatagaa
gatcaagaagctcaaagcccttcagatcatgctgcttacgaattattaaaagaacaattg
gaagacgttttagatacattaactgatagagaagaaaatgtattacgtttacgttttggc
cttgatgatggtagaacgcgtactttagaagaagtaggtaaagtttttggtgttacaaga
gaacgaattcgtcagatagaagccaaagcattaagaaaattaagacacccaagtagaagt
aaacgtctaaaagactttatggattaa
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