Staphylococcus nepalensis: BJD96_06895
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Entry
BJD96_06895 CDS
T05272
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
snl
Staphylococcus nepalensis
Pathway
snl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BJD96_06895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snl03019
]
BJD96_06895
03400 DNA repair and recombination proteins [BR:
snl03400
]
BJD96_06895
Enzymes [BR:
snl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJD96_06895
Messenger RNA biogenesis [BR:
snl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BJD96_06895
DNA repair and recombination proteins [BR:
snl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BJD96_06895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
ATH60042
UniProt:
A0A291JJW5
LinkDB
All DBs
Position
1467594..1468973
Genome browser
AA seq
459 aa
AA seq
DB search
MLQHELQKWFGFDSFKPGQQAIIEHVLNGKDTLGILPTGSGKSLCYQLPTYIKQKPTLII
SPLISLMDDQVMQLKLHGEHYVSCIHSGLDENEKQQNMQLLKHSRFIFLSPEFLLQPHNF
KLIQNLDLGLIVLDEAHCLSEWGYDFRPHYALVGKIIDHFPEANVLALTATAPPYLTSDL
NQMLNKNFIIVKTTMNRENISLTHKNFEDDHAKLKWLLPLLEHSGPTIIYVSSKKMCLNL
AKAIYQYGFLTGIYHGDLTYQERHTVQHQFINNEIPIIVATSAFGMGINKKDIRTIIHFH
LTTSPSNYMQEIGRAGRDGAYSQAISLFQPDDSYLLETLLFADVITEEDVNTFELGMFLP
PEKIEILEVLFSYYSIKQLRHIFATAFQRKKQGYHRMLGYKQLDQCRRAYMVEFFGEELS
EKPNHCCDNDSELIDINIVNRKKVKRKMDYNEKLQNLFK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttacaacatgaattacagaagtggttcgggtttgactcgtttaaacctggacagcaa
gcaattatcgaacatgtactcaatggcaaagatactttaggcatattacctacaggtagt
gggaagagcctttgttatcaattgccaacttatattaagcaaaaaccaacacttattatt
tcacccttaatatctttgatggacgaccaagttatgcaattaaaacttcatggtgaacac
tatgtttcgtgtattcattctggtttagatgaaaatgaaaaacaacaaaatatgcaatta
ttaaaacatagtcgttttatatttttaagcccagaatttttgttgcaaccgcataatttc
aaactcattcaaaacttggatttaggcttgattgttttagatgaagcacattgtctttct
gagtggggatacgatttcagacctcattatgcgcttgtgggcaaaattatcgaccatttt
cctgaagccaatgtacttgcattaactgctacagctccgccatatttaacatctgactta
aatcagatgctaaataaaaacttcattattgtaaaaactacaatgaatagagaaaacata
tctctaacccataaaaacttcgaagacgatcatgctaagttaaaatggttgctaccactt
ttagaacattcaggaccgactattatatacgtttcatcaaaaaaaatgtgtctcaactta
gcaaaagcaatttatcagtatgggtttttaacaggtatttaccatggagatttaacttat
caagaaaggcacacagttcaacaccaatttataaacaacgaaatcccaattattgttgca
acaagtgcatttgggatgggcatcaacaaaaaagatattcgcactattatacatttccat
ttaactactagtccatctaattatatgcaagaaattggacgtgctggcagggatggtgca
tatagtcaagctataagtcttttccagccagatgatagttacctattagaaacgttgctg
ttcgctgatgttattacagaagaggatgtaaacacttttgagttaggcatgtttttgcct
ccagaaaagatagaaatattagaggttttatttagctattactctattaaacaattacgg
catatctttgcgactgcgtttcaaaggaaaaaacaaggttatcatcgtatgctgggctat
aaacagttagatcaatgtcgaagagcttatatggttgaattttttggagaggaattatca
gaaaaaccaaaccactgttgtgataatgattcagaattaattgatataaatatcgtaaat
agaaaaaaagtaaaaagaaaaatggattataatgaaaaattacaaaatcttttcaaataa
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