Staphylococcus nepalensis: BJD96_08410
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Entry
BJD96_08410 CDS
T05272
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
snl
Staphylococcus nepalensis
Brite
KEGG Orthology (KO) [BR:
snl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snl03032
]
BJD96_08410
03400 DNA repair and recombination proteins [BR:
snl03400
]
BJD96_08410
Enzymes [BR:
snl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BJD96_08410
DNA replication proteins [BR:
snl03032
]
Prokaryotic type
DNA Topoisomerases
BJD96_08410
DNA repair and recombination proteins [BR:
snl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BJD96_08410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Toprim_2
DUF2996
Auto_anti-p27
Cys_rich_CPXG
Motif
Other DBs
NCBI-ProteinID:
ATH60322
UniProt:
A0A291JKQ0
LinkDB
All DBs
Position
complement(1786408..1788474)
Genome browser
AA seq
688 aa
AA seq
DB search
MAENLVIVESPAKAKTIEKYLGKKYKVIASMGHVRDLPRSQMGVDVENDYEPKYITIRGK
GPVVKELKKHAKKAKKIFLASDPDREGEAIAWHLANILDLEDSTENRVVFNEITKDAVKE
SFKHPRGIEMELVDAQQARRILDRLVGYNISPVLWKKVKKGLSAGRVQSVALRLVIDREN
EIRNFKPEEYWKIEGEFRYKKSKFNAKFLHYKNKPYKLTNKNDVETITSQLDGDQFEVTK
VTKKEKTRYPANPFTTSTLQQEAARKLNFKARKTMMLAQQLYEGIDLKKQGTVGLITYMR
TDSTRISDQAKNEAKDYIKETYGDNYTSNRKAKGQGDQDAHEAIRPSSTLRTPNEMKSYL
TRDQHRLYKLIWERFVASQMAPAILDTVALDLTQNDLKFRANGQTIKFKGFMTLYVETKD
DSDEGKENKLPHIDEGEMVTATQIEPSQHFTQPPPRYTEARLVKTLEEMKIGRPSTYAPT
IDTIQKRNYVKNESKRFVPTELGEIVHEQVKEYFPEIIDVDFTVNMETLLDKVAEGEIAW
KKVISDFYSSFKQDVERAEEEMEKIEIKDEPAGEDCEVCGAPMVIKMGRYGKFMACSNFP
DCRNTKAIVKTIGVTCPKCKEGDVVERKSKKNRIFYGCSKYPECDFVTWDKPIGRDCPKC
KHYLVEKKQGRKSQVICSNCDYKEEEQK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
ttggcagaaaatttagtcatagttgaatcgcctgcaaaagctaaaaccattgaaaaatat
ttaggtaaaaaatataaagttatcgcatctatggggcatgtaagagatttgccgagaagc
caaatgggcgtagatgtagaaaatgactatgaacccaaatatattactatacgcggcaaa
ggtcctgttgttaaagaattaaaaaaacatgctaagaaagctaaaaaaatattcttagca
agtgaccctgaccgtgaaggtgaggcaattgcttggcatttggcaaacatattagactta
gaagattcaactgaaaatagagtagtatttaatgaaataacaaaggatgctgtgaaagaa
agttttaaacatccaagaggcattgagatggaacttgttgatgctcaacaagcaagaaga
atattagaccgtttagttggatataatatttctcctgttttatggaaaaaagtaaaaaaa
ggtctttctgctggtcgcgtacaatcagtcgctttgagattagtgatagatagagaaaat
gaaattagaaatttcaaaccagaagaatattggaaaattgagggcgaatttagatacaaa
aaatcaaaattcaatgctaaattccttcattacaaaaataaaccatacaaattaacaaac
aaaaacgatgttgaaacaataacgtcccagttagatggagatcaatttgaagtaacgaaa
gtaactaaaaaagaaaagacgcgttatcctgctaatccttttacgacctcgacgctgcaa
caagaagcggcgagaaaattaaactttaaagcgcgtaaaacaatgatgcttgcacaacaa
ctgtatgaaggtattgacttgaagaaacaaggtacggttggtttaatcacatatatgcgt
acggattctacaagaatttctgatcaagctaagaatgaagcaaaggattatattaaagaa
acttatggtgataattatacttcgaatcgcaaggccaaaggtcaaggagatcaagatgct
cacgaagctattagaccatcaagtactttacgtacacctaatgaaatgaaaagttacttg
actagagatcaacatagactatataaacttatttgggagcgattcgttgcaagtcaaatg
gctccagctattttagacacagtagcattagatttaacacagaacgatttaaaattccgt
gcaaatggccaaacaattaaattcaaaggatttatgactttatacgttgagacaaaagat
gacagtgatgaaggtaaagaaaataaattacctcatatcgatgaaggtgaaatggtaact
gcaactcaaattgaaccttcacaacattttactcaacccccaccacgttatacggaagca
agactcgtaaaaacgttagaagaaatgaaaatcggtcgcccatctacttatgcaccaact
attgatacaattcaaaaaagaaattatgttaagaatgaaagcaaacgctttgtaccaact
gagttaggtgaaattgtacatgagcaagttaaagaatatttccctgaaattatcgatgta
gactttacagttaatatggaaacgctattagataaagtggccgaaggagaaattgcttgg
aagaaagttatttctgatttttatagcagctttaagcaagatgtagagcgtgcagaagaa
gaaatggaaaaaattgaaattaaagatgaacctgccggtgaagattgtgaagtttgtggt
gcacctatggttataaaaatgggtcgatatggaaaatttatggcatgttccaatttccct
gattgtagaaatacaaaagctatcgttaaaacaatcggagtaacatgcccaaaatgtaaa
gaaggcgacgttgttgaacgaaaatctaaaaagaatcgtattttttacggatgctctaaa
tatccagaatgtgactttgtaacttgggataaaccaatcggccgtgactgtccaaaatgt
aagcattacttagttgaaaaaaaacaagggcgtaaaagtcaggttatttgctcaaattgt
gattacaaagaagaagagcaaaaataa
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