Staphylococcus nepalensis: BJD96_10030
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Entry
BJD96_10030 CDS
T05272
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
snl
Staphylococcus nepalensis
Brite
KEGG Orthology (KO) [BR:
snl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snl03400
]
BJD96_10030
Enzymes [BR:
snl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJD96_10030
DNA repair and recombination proteins [BR:
snl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BJD96_10030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ATH60612
LinkDB
All DBs
Position
complement(2125534..2128998)
Genome browser
AA seq
1154 aa
AA seq
DB search
MELNAYIGRAGTGKSHNIIEEIKNKMKQDPLGDPIVLIAPTQNTFQLEQAFVNDASLYGS
LRTEVLHFERLSHRVFQEVGGLTEQQLSKAGTEMMIYDIIQAYQSELKLYQSQVKYYGFS
EKLYEQIQDFKKYAVSPQDLESYVAANDLQTRTKHKLEDIALIYKHLEDRITGEYVSTED
SLQRFISLMHQSEWLKRAEIYIDGFHNFSTIEYQMIRALVQNTKKVTVALTTDGDKDVFS
LFRKASESLTHIEDIADDLNIRLNKKRFNDLQRFSNKELMHLEQNFNALQFESIASEGHI
SIIESSVMREEINEVARRILKENRELGRRFQDIAILYRDETYAYLMESILPQYDIPYNID
IKASMTHHPIMEMLRSLIEVLQTNWNFDPLMRLFKTNVLTKKYKDSQYLIDILENFVLER
GVYGKRWIDDQYFQVEQFRKMGLKRQPLTDEERHTFERVIQLKTDVIDKIMRFENQMADA
STAVEFATAFYEAIETFDLPSQLMTERDTLDTEGEHRKAEEIDQLWHGFIQTLDDLVSVF
GTQTMTQNRFLELLDIGLDQLEFVMIPQTLDQVSIGTMDLAKVDNKQHIYLVGVNDGVLP
QTVSSSGLITDEEKKYFQEQSAIELSPTADILQMDEAFVCYIAMTRGCSDVTFSYSLMGT
KGDEKEPSPFLNQIQQLFTNLDIQNIHHQHQANPLTLMEHPHQTKIALFESLKAWLDDEI
VADTWLDTYQVMRDDAQLNEGLTYLLSALTYDNETVQLSESLSKDLYGTTINASVSRFEG
YQSCPFKHFASHGLRLNERTKYKLENFDLGDIFHQVLKFISEKVNGDFKNLNVNQIHKLT
SEALSEILPEIQFNLLNSTAYYRYLSQRIGSIVETTLTALKYQGSYSKFIPQRFEAGFRR
KPRDNEELYAQPLQTKQGIPINIRGQIDRIDTYNHGEESFVNIIDYKSSKYSGTLDLTKV
YYGMQMQMMTYMDIVLQNKSRLGLTNMTKPGGLLYFHVHEPRIKLAWNELNETKRDTEFI
QSFKLSGLLNSDDAVLEAFDTRLEPNYNSDIVPLGLKKDGGIKRNSKVADEKTIYKLIQH
NKRNFIETASNIMDGHTEVAPMKYNQTLPCDFCNYKPVCHVDGMIDSKRYRTVDEAINPL
EAVQDLELESEEEE
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaatgcatatatcgggagagccggtactggcaaatcccacaatataatagaa
gaaataaaaaataaaatgaaacaggatccgttaggagatcccattgtattgattgcacct
acacaaaatacttttcaacttgaacaagcttttgtaaacgatgcaagtttatacggtagt
ttgaggactgaagtgctccatttcgaacgtttaagtcatcgagtattccaagaggttggt
ggattgacagaacaacaattatccaaagcaggtactgaaatgatgatttatgacatcatt
caagcataccaatcagaattaaaactatatcaatcgcaagttaaatactatggtttcagt
gaaaaactctatgaacaaatacaagattttaaaaaatatgcagtttctccacaagattta
gaatcatacgtcgctgcgaatgatttacaaacaagaacgaagcataaattagaagatatt
gcgttaatttataagcacttagaagatagaattactggtgaatatgtttctacagaggat
agtttacaacgctttatttcgctcatgcatcaatctgaatggttaaaacgcgctgaaata
tatattgatgggtttcataacttttctacaattgaataccaaatgattcgtgctttagta
caaaatacgaaaaaagtaacagtcgcattaacgactgatggggataaagacgtctttagt
ttatttagaaaagcctcagagtcattaacacatattgaagatattgctgatgacttaaat
attcgtttgaataagaagcggtttaatgatttacaaagattttctaacaaagaactaatg
catctagaacaaaattttaatgcactacaatttgaatctatcgcttcagaaggccatata
tctatcatagaatcatcagttatgcgtgaagaaattaatgaagttgcaagacgtatctta
aaagaaaatcgagaattgggtagacgctttcaagatattgctattttatatagagatgaa
acatatgcttatttaatggaatccattttaccccagtatgatattccatataacattgat
attaaagcttcaatgacacatcatcctattatggagatgctccgatcattaattgaagtg
ctacaaacaaattggaactttgatcccttaatgcgtttgtttaaaaccaatgtattaaca
aaaaaatataaagatagccaatatcttattgatattttggagaactttgtattagaacga
ggggtttacgggaaacggtggatcgatgaccagtatttccaagttgagcaatttagaaaa
atgggcttaaaacgacaaccattaacagatgaagaacgtcatacgtttgaaagagtgatt
caattaaaaacggatgttatagataaaattatgcgttttgaaaatcaaatggctgatgct
tcgactgctgtagaatttgctacggcattttatgaagcaatagaaacatttgatttaccg
agtcaattaatgactgaacgtgatacgttggatacggagggtgaacatcgtaaagctgaa
gaaatagatcaactatggcatggttttatccaaacgctagatgatttagtttctgtattt
ggtactcaaacgatgacacaaaatagatttttagaactgttagatattggattggatcag
ttagagtttgttatgattcctcagacacttgaccaagtgagtattggtacaatggattta
gctaaagtcgataataaacaacacatatatcttgttggagtgaatgatggtgtactacca
caaactgtaagttcatctggactgattacagatgaggaaaagaaatatttccaggaacag
tcagctattgagctcagccctacagctgatatattacaaatggatgaagcatttgtatgt
tatattgctatgactcgaggatgttcagatgttaccttttcatattcgttgatgggtact
aaaggcgatgaaaaagaacctagtccattcttaaatcaaattcaacaactattcactaac
ctagacatacaaaatatccatcaccaacatcaagcaaacccacttacattaatggagcat
cctcatcaaacaaagattgctttattcgaatcactgaaagcttggcttgatgatgagatt
gttgctgatacatggctagatacatatcaagtcatgagagacgatgctcaactcaatgaa
ggattgacttatctattatcagcattaacttatgataacgaaacggtacaacttagcgaa
tcgttatcaaaagatttatacggtacgactatcaatgcaagcgtgtcacgttttgaaggt
tatcaatcatgtccttttaaacatttcgcttcacatggattaagacttaatgagcgtaca
aaatataaattagaaaactttgatttaggagatattttccatcaagtgttaaaatttatt
tcagaaaaagtgaatggtgatttcaaaaatttaaatgtaaaccaaattcataaattaaca
agtgaagcattatctgaaatactaccagagatacaatttaatttattaaattccacggct
tattatcgatatttatcacaacgtataggttctattgttgaaacgacattaactgcatta
aaatatcaaggcagttatagcaaatttatacctcaacgatttgaagcgggcttcagaaga
aaacctagagacaacgaggaattatatgcccaaccgttacaaacaaaacaaggcatccct
attaatattcgtggtcaaattgaccgtatcgatacgtataatcatggagaagaaagtttt
gtaaacattattgattataaatcttctaaatacagtggtacgctcgatttgacgaaagtt
tattatggtatgcaaatgcaaatgatgacgtatatggatattgtactgcagaataaatct
agacttgggctaacaaatatgacaaaacctggtggcttattgtattttcatgtacatgaa
ccacgtattaaattggcttggaatgaattaaatgagactaaacgtgatacagaatttatt
caatcatttaaattaagtggtttgttgaacagtgatgatgctgtattagaagctttcgat
acaaggttagagccgaattataattcagatattgtgccacttggtttgaaaaaagatggc
ggcatcaagcgtaatagtaaagttgctgatgaaaagactatatataaattaatccaacac
aataaacggaattttattgaaacagcatctaatattatggatggtcacacagaagttgca
ccaatgaaatataatcaaacgttaccatgcgatttctgtaattataaacctgtgtgtcat
gtagatggcatgattgacagtaaaagatatcgaactgtagatgaagcaatcaatccgcta
gaagcagttcaagatttggaattagaaagtgaggaagaagaatga
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