Streptococcus pneumoniae 70585 (serotype 5): SP70585_0201
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Entry
SP70585_0201 CDS
T00872
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
snm
Streptococcus pneumoniae 70585 (serotype 5)
Pathway
snm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SP70585_0201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snm03019
]
SP70585_0201
Messenger RNA biogenesis [BR:
snm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SP70585_0201
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_6
DUF4453
Motif
Other DBs
NCBI-ProteinID:
ACO16639
UniProt:
C1CAF0
LinkDB
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Position
complement(176750..178429)
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AA seq
559 aa
AA seq
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MAYTLKPEEVGVFAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYSY
IVDNIDRVKAVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRNAKL
YEINHNTELTFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDFTPVGEPADLH
RMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIQGIEGRIIFASFASNIFRLQ
QATEAAVKTGRKIAVFGRSMEKAIVNGIDLGYIKAPKGTFIEPNEIKDYPAGEVLILCTG
SQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINIISEAGVEVIHGK
VNNIHTSGHGGQQEQKLMLCLIKPKYFMPVHGEYRMQKVHAGLAVDTGVEKDNIFIMSNG
DVLALTADSARIAGHFNAQDIYVDGNRIGEIGAAVLKDRRDLSEDGVVLAVATVDFKSQM
ILSGPDILSRGFVYMRESGDLIRQSQRILFNAIRIALKNKDASVQSVNGAIVNAIRPFLY
ENTEREPIIIPMILTPDEE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcctacactcttaaacctgaagaagtcggcgtttttgccatcggtggtctaggagaa
atcgggaaaaacacttacggaattgaataccaagacgagattatcatcgtcgatgctggg
attaaattcccagaagatgacttgcttggtatcgactatgtcattcctgactactcttac
atcgtggacaatatcgaccgcgtcaaggctgttttaatcacacacggacacgaggaccac
attggtgggattccgttcctactcaagcaagcaaatgtccctatctacgctggaccgctt
gccttggctttgatccgtgggaaactcgaagaacacggcctcttgcgcaacgccaaactt
tacgaaatcaaccacaacaccgagttgacctttaaaaatctcaaggcaactttctttaga
acgactcactctattccagagcctttggggattgtcattcatactcctcaagggaaaatc
gtctgtacgggtgactttaagttcgactttactccagttggagaacctgcggacttgcat
cgtatggctgcgcttggtgaagaaggcgtgctctgtctcctgtctgactcgacaaatgcg
gaagtaccaacctttaccaactctgaaaaagtcgttggtcagtccattatgaagattatc
caaggtattgaaggacgtatcatctttgcatcctttgcctcaaatatcttccgtctccag
caggcaacagaagctgctgttaagactggacgcaagattgcggtctttggtcgttctatg
gaaaaggccattgtcaacggaatcgatcttggctacatcaaagctcctaagggaaccttt
atcgagccaaatgaaatcaaagattatcctgcaggagaagttcttatcctctgtacaggt
agtcagggtgagcctatggcagccctctctcgtatcgccaacggaacccaccgtcaagta
caattacaaccaggtgataccgttatcttctcttctagtcccatccctggaaacactact
agcgtcaacaagctgattaacatcatttctgaagctggtgtcgaagttatccacggtaaa
gtgaacaatatccatacatctggacacggtggtcagcaagagcaaaaactcatgctctgc
ttgattaagccaaaatacttcatgcctgtccacggtgaataccgcatgcaaaaagtccac
gctggactagcagtggatactggtgttgagaaggacaatatctttatcatgagcaatggc
gatgtgcttgcccttactgctgactcagctcgtatcgcaggtcatttcaacgcccaagat
atctatgtcgatggaaatcgtatcggtgaaattggcgcagctgtcctcaaagatcgtcgc
gatctatctgaagacggtgtcgttctggcagttgcaactgttgacttcaaatcgcagatg
attctatctggtccagacatcctcagccgaggctttgtctacatgagagagtctggcgac
ttgattcgccaaagccagcgtatcctcttcaatgccattcgtatcgcactgaaaaataag
gatgctagcgtgcaatctgtcaatggtgccattgtcaacgctattcgccccttcctctat
gaaaataccgaacgtgaaccgatcatcatcccgatgatcctcacaccagatgaagaataa
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