Sphaerotilus sulfidivorans: EWH46_04035
Help
Entry
EWH46_04035 CDS
T06182
Name
(GenBank) type IV secretion protein Rhs
Organism
snn
Sphaerotilus sulfidivorans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
PAAR_motif
RHS
DUF6531
Motif
Other DBs
NCBI-ProteinID:
QEN00031
UniProt:
A0A5C1PXT4
LinkDB
All DBs
Position
839683..844434
Genome browser
AA seq
1583 aa
AA seq
DB search
MGLPAAACIDDEIRHTPPVAMVLKVATTIGAGLLTGLAIGAAAVFIVGSGGLGAVVVGAV
VAAVIGTAADAASEALTGHSLQDVIAAPIMSAIDKFFPGVPKGVIATGSPNVKINSKKAA
RAAGKAGAASPPPLLPATWWAAAVDAVLSLFSAEATPPTPGFAPVDQDKVACQDHPPKPD
QFIAQGSGNVFINGQPAARAGDKTTCDAVLSVLPGRRGNVAIGGGQVTVRAVTSEMPSWL
GFVAKWGGFAIAVCQAMRGRGPLLKKVICLGSNMAIGMAADMGVHAVAGAVGRALSGNKG
YPVHIPSGNKVLTGDDDLDFVVPARMPVYGMRRYNAANAIEGLFGLGWSTLWDTRLFLHR
PDVLGEDDDLAVHALLDEQGRWLPLPDLAPGQRHHLAQEGLTYAHLDSGHHLLMRDDGLV
LDFGVPVDPGTQVLALQCVEDPNTQRHFLRRDDRGRLVRLTTNCGQQVDFHYSAAHPVRP
ERVTFRPAGHTGEPLLLASYAYTAQGQLSEVRDALNQLTRQFGYTAQGWMNFQRLSSGLE
VRYQWSHFEQVAQANQVNQAHLSDQPGHWRVTGWQTSLGEQVELTVDVAAGHARAETRGA
GLAGPRSEQWWWDADLRVQRYADALDQQTELAWHPEQRQLLALHAPGGADCTFEYDERGN
LSTVRDPLGRCTHTQWHEQLDRPLSRTSPDGSTQQWTYDEVGNLLSATYQPAPSEAAPPE
LVERWVHDEHGQVVAHTDVRGGTQFQAYTSHGQVRRFMDCSGHSTTMEWGERGELLTERD
AAGRVTQWRCDALGQPLMARLPDGSEQHWRWSEAGQLLASVSANPQGQSNGDQRRYAYNP
LGQLMRQVDPLGQAVEYDYNALGELQTLRDAAGQVTWFEQDALGRLIGQVGCDGLRTEYR
LDAQGWPVAVTQGAGSVEPLVIRLERDVIGRLLVKHTGHSLSRYGYDKADRLTRVQRWAA
PDPVRPEAEPPLWDEHQFIYDAYGHLAEEHAAHWPQQLSTRLDSDDAPKRIPRRSVIRHQ
HDALGVRTATTLPGPDAETPGPTLNYLHYGSGHLHQINLDGRVISDIERDALHREVHRTQ
GNLRTLWSRDALGRPTWQMCVSGEPHLQTAADRWASLARPLAPWTPMSKGYRWDDRGELA
ERRDAVQGEQHLRYDALGRITLSVNEPIGALPDVGYAAPNPPPDAFHPDWREQFDWDAAS
NPSGGVTASVNGQSRGYVRHNRLLTYRDQRYEYDLHGRLTHKRVGRHTEQSLKWNAEHQL
VEVATRRNGTLQTVRFEYDALGRRIAKHHSFGSTHFVWEGLRLLQEQHARRITTLVYEPG
SYAPLARIDTPSFDELRYIPDNTPAPPRLYWFHNNISGAPEELTDKEGRIHWRGRYQTWG
NLALQETPDADSDRYARPKLDEQPLRFQGQYADSESGLHYNTFRYYDPDCGRFISQDPIG
LAGGLNLYQYAPNPVSWVDPWGWITCGITGEDVGKASNLPIIKPGTKLWKQAQASIEKGG
KSNFRTATRADAEALTMQGRKGIQRVGSDVDPYNSSGSSYKRGYEVHPDESHTINAPEND
LPHIKWKDWSSGKSSGGAGHVFF
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgcctgctgcggcctgcattgatgacgaaattcgccacacccctccagtggcc
atggtgctgaaggtcgccacgaccatcggggcgggcctgctcacgggtctggctattggg
gcagccgccgtcttcatcgtcggcagcggcggcttgggtgccgtggtggtgggggcggtg
gtcgcggccgtcatcggcacggcggccgacgcagcgtcagaggcgttgacgggccacagc
ctgcaagacgtgatcgccgcacccatcatgtcggcgatcgacaaattcttccccggggta
cccaagggggtgatcgcgaccggatcgccgaacgtcaagatcaacagcaagaaggccgcc
cgagccgccggcaaggcgggggcggcatcaccaccgccgctgctgcccgcaacgtggtgg
gcggcggccgtcgatgccgtgttgtcgttgttcagtgccgaagccacgccgcccacgccc
gggtttgcaccggtggaccaggacaaggtcgcctgtcaggaccatccgcccaagccggac
cagttcattgcacagggctcgggcaatgtgttcatcaacggtcagcctgccgcgcgtgcc
ggggacaagaccacgtgcgacgccgtgctcagcgtcctgcctggtcgccggggcaacgtg
gcgatcggaggcggtcaggtcaccgttcgggccgtcacatcggagatgcctagctggctg
ggcttcgtggccaagtgggggggcttcgcgattgcggtgtgccaggccatgcgagggcgt
gggccgctgctgaagaaagtgatctgcttgggctccaacatggcgatcgggatggcggcg
gacatgggtgttcacgcagtggcgggcgccgtgggccgagcgctgagtggcaacaaggga
taccctgtccacatccccagcggcaacaaggtgctgacgggcgatgatgacctggacttc
gtggtgcctgcgcgcatgcctgtctacgggatgcgtcgctacaacgcggccaatgcgatc
gaagggctgttcggcctggggtggagcacgctctgggatacccgattgttcctgcaccgc
ccggacgtgctgggcgaggacgatgacttggccgttcacgcgctgctggacgagcagggc
cgctggctgccgctgccagatctggcgccagggcagcgccaccacctggcccaggagggc
ctgacctacgcccacctcgatagcggtcaccatctgctgatgagggacgatgggctggtg
ctggacttcggcgttcctgtcgacccgggtacccaggttctggcgctgcagtgcgtggaa
gaccccaatacccagcgccacttcctacgccgggatgaccggggccggctcgtacggttg
acgaccaactgcggccagcaggtggacttccactacagcgcggctcatccggtgcggccc
gagcgcgtgaccttccgcccggcgggccacaccggcgagcccttgctgctggcgagctac
gcctacaccgcgcagggacagttgagcgaggtgcgcgatgccctgaaccagctcacccgg
cagttcggctataccgcgcaagggtggatgaacttccagcgcctgagcagtggcctggag
gtgcgctaccagtggtcgcatttcgagcaggtggcgcaggccaaccaggtgaatcaggcg
cacctgtcggaccagccggggcattggcgggtgacgggctggcagaccagcttgggtgaa
caggtcgagttgaccgtggacgtggcggcggggcacgcccgcgccgagacccggggcgct
ggcctcgccgggccgcgcagcgagcaatggtggtgggacgccgacctgcgggtgcagcgc
tacgccgacgcactggaccagcagaccgaactcgcgtggcaccccgaacaacgccaactg
ctggccctgcatgcgccgggcggggcggactgcacgttcgagtacgacgagcggggcaac
ctgagcactgtgcgagacccgctgggccggtgcacgcacacgcagtggcacgagcagttg
gaccgtccgctgtcgcgcacctcgccggacggcagcacccagcagtggacctatgacgag
gtgggcaacctgctgtcggcgacctaccagccggcaccgtcggaggctgctccgccagag
ttggtggagcgctgggtccatgatgagcacgggcaggtggtggcgcacaccgatgtgcgt
gggggcacgcagttccaggcgtacacctcgcacgggcaggtgcggcgcttcatggactgt
tcggggcacagcacgacgatggaatggggcgagcgcggcgagttgctgactgagcgggac
gcggccgggcgggtgacgcaatggcgatgcgacgcgctgggccagccgctgatggcacga
ttacccgatggcagcgagcagcactggcggtggagcgaggccggacagttgctggccagc
gtgagcgcgaacccgcagggccagtccaacggtgatcagcgccggtatgcctataacccg
ctgggtcaattgatgcggcaggtcgatccactgggccaggcggtggagtacgactacaac
gcgctgggtgaattgcaaactctgcgcgacgcggccgggcaggtcacctggttcgagcag
gacgcgctgggtcgactgatcgggcaagtcggctgcgatgggctgcgcaccgaataccgg
ctcgacgctcagggctggcctgtggcggtgacgcagggggcgggtagtgtcgagccgctg
gtcatcaggctggagcgcgatgtgatcgggcggctgctggtcaagcacacgggccacagc
ctgagtcgctatggctacgacaaggcggatcggctcacccgcgtgcagcgctgggctgca
cccgacccggtgcgcccagaggccgagccgcctttgtgggacgagcaccagttcatctac
gacgcttacgggcatctggccgaagagcacgccgcgcactggccgcagcagctatccaca
cgcctcgacagcgacgacgcccccaagcgcataccgcgccgcagcgtcatccggcaccag
cacgacgcgcttggcgtgcgcacggccaccaccctacccgggccagatgccgaaacccct
ggtccgacgctgaactatctgcactatggctcgggccatctgcaccagatcaacctcgac
ggccgggtgatcagcgacatcgagcgcgatgcgctgcatcgcgaagtgcaccgcacgcag
ggcaatctgcgcacgctgtggagccgtgacgcgctgggccggcccacctggcagatgtgc
gtctcgggcgagccgcacttgcagaccgctgctgatcgctgggcgagcctggcgcgcccg
ctggcgccgtggacaccgatgagcaaaggctaccgctgggacgaccgaggtgaactggcc
gagcggcgcgacgcggtgcagggcgaacaacatctgcgctacgacgcgctcgggcgcatc
accctcagcgtcaacgagcccatcggcgcactgcctgacgtgggctacgcggctccgaat
ccaccgcccgatgccttccaccccgactggcgcgagcagttcgactgggacgccgcgtcc
aaccccagcggcggtgtcaccgcctcggtcaacggccaaagtcgcggctacgtgcgccac
aaccgcctcctgacctaccgggaccagcgctacgagtacgacttgcacggccgcctgacg
cacaagcgcgtcggccgccacaccgagcaatccttgaaatggaacgctgaacaccagctc
gtcgaggtcgccacccggcgcaacggcacgctgcagaccgtgcgcttcgagtacgacgcg
ctcggccggcgcatcgccaagcaccacagtttcggcagtacccacttcgtctgggagggg
ctgcgcctgctgcaggagcagcacgctcggcgcatcaccacgctggtctacgagcccggc
agctacgcgccgctggcacgtatcgacacgccctcgttcgacgagttgcgctacatcccc
gataacaccccggcgccgccgcgtctgtactggttccacaacaatatcagcggcgcgccc
gaggagctcaccgacaaggaaggccgcatccactggcgtgggcgttatcagacctggggc
aacctcgctcttcaggaaacacccgatgcagattcagaccgttacgcccggcccaagctc
gatgagcagccgctgcgcttccaggggcaatatgccgactcggagtccgggcttcactac
aacacgttccggtattacgatccggattgtgggcggttcatcagtcaggatccgattgga
ctcgcgggtgggttaaatctctatcagtatgcgcctaatccggtttcttgggtggatcct
tgggggtggataacttgtggcattacaggagaagatgtagggaaggcatccaacctccca
attataaagcctggcactaaactttggaaacaagcgcaggcatcgatcgaaaaaggtgga
aaatcaaactttaggacggctaccagagcagatgcggaagcattaactatgcaaggccgc
aaggggattcagcgagtagggtctgacgttgacccatataattcatccggctcgtcatac
aagcgaggatatgaggtgcacccagatgaatctcatacaatcaatgcgccagaaaatgac
ttgcctcacattaaatggaaggattggtcaagtggaaaatcatccggcggagcagggcat
gtttttttctga
DBGET
integrated database retrieval system
