Sphaerotilus sulfidivorans: EWH46_05470
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Entry
EWH46_05470 CDS
T06182
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
snn
Sphaerotilus sulfidivorans
Pathway
snn03410
Base excision repair
snn03430
Mismatch repair
snn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EWH46_05470 (recJ)
03430 Mismatch repair
EWH46_05470 (recJ)
03440 Homologous recombination
EWH46_05470 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snn03400
]
EWH46_05470 (recJ)
DNA repair and recombination proteins [BR:
snn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EWH46_05470 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EWH46_05470 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EWH46_05470 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF2065
Motif
Other DBs
NCBI-ProteinID:
QEN00284
UniProt:
A0A5C1Q0V0
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All DBs
Position
complement(1186147..1187877)
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AA seq
576 aa
AA seq
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MTPQLELRDVPPRAAWALEQAGVHPLLARLFAARGVSRADELDDGLARLLPPDTMKGTPE
AAQLLADTIDAGRNIVVVADYDCDGATACAVALRGLAMLGARPGTLHHVVPDRAVHGYGL
TPPIVDLARVFDPALLVTVDNGIAGHAGIDHAHALGIQVLVTDHHLPAVDAEGRPDLPGA
DVIVDPSQPGCAFESKAIAGVGVMFYVLLALRAELRRRGRFDAASQPRLDALLDLVALGT
VADVVKLDANNRRLVSQGLRRIRAGRMQPGVAALFAAAGRDPQRAGSTDFGFALGPRLNA
AGRLADMSIGIACLLCDDPAQAAELARTLDAINRERRDVEAGMREQAALLLESLMPAGTP
PPAIVLHDEAFHEGVVGIVAGRLKERLHRPTFVFALGGDGLLKGSGRSIPNFHLRDALDR
VSKRHPALLRRFGGHAMAAGCTIAPQDFDAFAQALQDIAREELDEATLQRRLATDGPLEL
RWFEADTVSLLEAQVWGQAFDAPVFVDEVEVVKQRLIGGDKHLKLSVRHAGQLRDAVWFH
HAEPVPERVRLAYRLALDTWQGQSRVQMMVEAAEPL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgcaactcgaactccgcgatgttccgccccgcgccgcctgggcgctcgagcag
gccggcgtgcatccgctgctggcgcggctcttcgccgcccggggcgtgagccgcgccgac
gagctcgacgacggcctggcccggctgctgccgcccgacacgatgaagggcacgccggag
gccgcgcagttgctggccgacacgatcgacgccggccggaacatcgtcgtcgtcgccgac
tacgactgcgacggcgcgaccgcctgcgcggtggcgctgcgcgggctggcgatgctgggc
gcgcgccccggcacgctgcaccatgtcgtgcccgaccgcgcggtgcacggctacggcctg
acgccgccgatcgtcgatctggcgcgtgtcttcgacccggcgctgctggtcaccgtcgac
aacggcatcgccggccatgccggcatcgaccacgcgcacgcgctcggcatccaggtgctg
gtgaccgaccaccacctgccggcggtcgatgccgaaggccgtcccgacctgcccggcgcc
gacgtcatcgtcgacccgagccagccgggctgcgccttcgagagcaaggccatcgccggc
gtcggcgtgatgttctatgtgctgctggcgctgcgcgccgagctgcgccggcgcggccgc
ttcgacgccgccagccagccgcggctggacgcgctgctcgacctggtcgcgctgggcacg
gtcgccgatgtggtgaagctcgatgccaacaaccgccggctggtctcgcaggggctcagg
cgcatccgcgccgggcgcatgcagcccggggtggcggcgctgttcgctgcggccgggcgc
gatccgcagcgcgccggctcgaccgacttcggcttcgcgctgggcccgcgcctgaacgcg
gccggacggctggccgacatgtcgatcggcatcgcctgcctgctgtgcgacgacccggcg
caggcggcagagctggcgcgcacgctcgacgcgatcaaccgcgagcgccgcgatgtcgag
gccggcatgcgcgaacaggccgcgctgctgctggagtcgctgatgcccgcaggcacgccg
ccgccggcgatcgtgctgcacgacgaggccttccacgagggcgtggtgggcatcgtcgcc
gggcggctgaaggagcggctgcaccggccgaccttcgtgttcgcgctgggcggcgacggg
ctgctgaagggctcgggcaggtcgattccgaactttcatctgcgcgacgcgctcgaccgg
gtcagcaagcgccaccccgcgctgctgcgccgcttcggcggccatgcgatggcggcgggc
tgcaccatcgcgccgcaagacttcgacgccttcgcgcaggcgctgcaggacatcgcccgc
gaggagctggacgaagccacgctgcagcggcgcctggccaccgacggaccgctggagctg
cgctggttcgaggccgacaccgtctcgctgctggaggcgcaggtctggggccaggccttc
gacgcgccggtcttcgtcgacgaggtcgaggtggtcaagcagcgcctgatcggcggcgac
aagcacctgaagctgtcggtgcgccatgccggccagctgcgcgacgcggtctggttccac
cacgccgagccggtgcccgagcgggtgcggctggcctaccggctcgcgctcgacacctgg
cagggccagtcgcgggtgcagatgatggtcgaggcggccgagccgctctga
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