Sphaerotilus sulfidivorans: EWH46_11985
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Entry
EWH46_11985 CDS
T06182
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
snn
Sphaerotilus sulfidivorans
Pathway
snn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EWH46_11985 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snn03400
]
EWH46_11985 (recB)
Enzymes [BR:
snn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EWH46_11985 (recB)
DNA repair and recombination proteins [BR:
snn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EWH46_11985 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
WapI
AAA_lid_7
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QEN01431
UniProt:
A0A5C1Q1N5
LinkDB
All DBs
Position
complement(2660538..2664374)
Genome browser
AA seq
1278 aa
AA seq
DB search
MSTRLDPLTLPLRGSRLIEASAGTGKTWTIAALYLRLVLGHGDHGTREPRALLPAQILVM
TFTRAATRELSSRIRERLIDAARLFRDPAALAASGDAFVQALAADCADEAARSRAAHRLA
LAAEGMDEAAVHTIDAWCQRTLREHAFDSGSLFTEELVADEAELLQQAVLDVWRREVYPL
PMAALELLHRQWPDAEAMGRQARPLLMHEELLDTADGAQALPDWLPDWVETRRARLLALK
AGWVERAEAMFTWIHRQQNGPKPPFSGVKVNPKSLEKWHGQIVAWAEDALAERLVLQPDT
GVRRLTPDGLREALKKNHDCGEIPAAFAEFEALQAELAALEPPGPRLLRHAARRIAQRLD
QLKRASAQFGFADLQRRLEQALAGEAGPRLREGILAQYPVALIDEFQDTSPLQYRLFDRL
YRVADDDPATALLMIGDPKQSIYRFRGADIYSYLAVRRATAGRHHALGTNYRSTKALVGA
VNAVFLQAEQRRPGEAFGFGGPAEPGAGREATLPFDPVGAKGRDETLGRGDTALPALQIE
WLPTPLPAEELRETLARRAAERIVDWLDDASLAFRRPGGEARRLAPGDIAVLVRNRREAE
AVRRALRRAGVASVYLSDQDPVFDTAEARDLLRWLQAVAEPQDTRLARAAFATATVGLSL
DELARLVHDDVAWDARLALLAQLRRVWQRQGVLTLVRQTLHLLDLPARWLAGQEVADGER
RLTNLLHLGELLQSASSRLEGEQAQIRWLAEQISGLGSGGGQAGSDERVVRLESDAELVQ
VVTVHKSKGLEYPVVVMPFAASARPVKKGDAPFVERVDAEGRRRLDFAPDGEALDEAERE
RLREDLRLFYVALTRPRHLLWLGVGLARKPRAQNEHLLHQSALGHLLGGGAAMTVDQVGQ
ALQALCAFRPPDPFVAGAIEVTPLRPVTRRPRLQRRAPAHPLAEPPVYRAAFDRDWAVGS
FTALVRDLKEATASPRLEADAESDADAEVWDRSGLPALLADPRRQEQVREEWAVQPTGDP
AVEPAAETGAEPAWHRFPSGPLPGNFLHELLQLLAQEGFGCRTEPAVRWMAQRRCKRAGH
GERTEEVLDWMDAVLAAPLPPLGGTPLTQIVTLLPEMEFWMPSQQLDSIAFDRLCRQALL
PGRDRPALVSRQLDGMLMGFIDLVFEHEGRWWVIDYKSNRLGERDADYDRATLERAVLAH
RYELQSVLYLLALHRLLRSRLGADYDPQAHLGGAICLFLRGIHGPERGCVLLRPTAEMLD
ALDRTVGPLPDNGSHDSI
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcggctcgatccgctgaccctgccgctgcgcggctcgcgcctgatcgaggcc
agcgccggcaccggcaagacctggaccatcgcggcgctctacctgcgcctggtgctcggc
cacggcgaccacggcacgcgcgagccgcgggcgctgctgccggcgcagatcctggtgatg
accttcacccgcgcggcgacgcgcgagctgtcctcgcgcatccgcgagcggctgatcgat
gcggcgcggctgttccgcgaccccgcggcgctggcggccagcggcgacgccttcgtgcag
gcgctggccgccgactgcgccgacgaggcggcccgctcgcgcgccgcgcatcggctggcg
ctggccgccgagggcatggacgaggcggcggtgcacaccatcgacgcctggtgccagcgc
acgctgcgcgagcatgccttcgacagcggcagcctgttcaccgaggagctggtcgccgac
gaggccgagctgctgcagcaggcggtgctcgatgtctggcgccgcgaggtctatccgctg
ccgatggccgcgctggagctgctgcaccgccagtggcccgatgccgaggcgatgggccgc
caggcccggccgctgctgatgcacgaggagctgctggacaccgccgacggcgcgcaggcg
ctgcccgactggctgccggactgggtcgagacgcgccgcgcgcggctgctggcgctcaag
gccggctgggtcgagcgggccgaggcgatgttcacctggatccatcgtcagcagaacgga
ccgaagccgccgttcagcggcgtcaaggtcaatccgaagtcgctggagaaatggcacggc
cagatcgtcgcctgggccgaggatgcgctggccgagcggctggtgctgcagcccgacacc
ggcgtgcggcggctgacgcccgacggcctgcgcgaggcgctgaagaagaaccacgactgc
ggcgagatcccggccgccttcgccgagttcgaggcgctgcaggccgagctggcggcgctg
gagccgccgggcccgcgcctgctgcgccatgcggcgcggcgcatcgcgcagcggctcgac
cagctcaagcgcgcctcggcgcagttcggcttcgccgacctgcagcgccggctcgagcag
gcgctggcgggcgaggccggcccgcggctgcgcgagggcatcctggcgcagtacccggtc
gcgctgatcgacgagttccaggacacctcgccgctgcagtaccggctgttcgaccgcctc
taccgggtcgccgacgacgatccggccaccgcgctgctgatgatcggcgacccgaagcag
tcgatctaccgcttccgcggcgccgacatctacagctacctggcggtgcgccgtgccacc
gccgggcgccaccacgcgctgggcaccaactaccgctcgacgaaggcgctggtcggtgcg
gtcaacgcggtcttcctgcaggccgagcagcgccggcccggcgaggccttcggcttcggt
ggtccggccgagccgggtgccggccgcgaggccacgctgcctttcgatccggtcggcgcg
aaggggcgcgacgagacgctgggccgtggcgacaccgcgctgccggcgctgcagatcgag
tggctgccgacgccgctgccggctgaggaactgcgcgagacgctggcgcgccgcgccgcc
gagcgcatcgtcgactggctcgacgacgcgagcctggcctttcgccgccccggcggcgag
gcgcgccgcctggcgccgggcgacatcgcggtgctggtgcgcaaccgccgcgaggccgag
gcggtgcgccgggcgctgcgccgggccggcgtggcctcggtctatctgtccgaccaggat
cccgtcttcgacaccgccgaggcgcgcgacctgctgcgctggctgcaggcggtggccgag
ccgcaggacacccggctggcgcgtgcggccttcgccaccgcgacggtcgggctgtcgctc
gacgagctggcgcggctggtgcacgacgatgtggcctgggacgcgcggctggcgctgctg
gcgcagctgcgccgcgtctggcagcgccagggcgtgctgacgctggtgcgccagacgctg
catctgctggacctgccggcgcgctggctggccggccaggaggtggccgacggcgagcgg
cgcctgaccaacctgctgcacctgggcgagctgctgcagtcggccagcagccggctcgag
ggcgagcaggcgcagatccgctggctggccgagcagatctcgggcctgggcagcggtggc
ggtcaggccggcagcgacgagcgggtggtgcggctggagagtgatgccgagctggtgcag
gtcgtcacggtgcacaagtccaagggcctggaatatccggtggtggtgatgcccttcgcg
gcgtcggcgcggccggtgaagaagggcgatgcgccgttcgtcgagcgggtcgatgccgag
ggccggcgccggctggacttcgcgcccgacggcgaggcgctggacgaggccgagcgcgag
cgcctgcgcgaggatctgcggctgttctatgtcgcgctgacccggccgcgccatctgctg
tggctgggcgtcggcctggcgcgcaagccgcgtgcacagaacgagcatctgctgcaccag
agcgcgctcggccatctgctcggcggcggcgccgcgatgacggtcgatcaggtcggacag
gccctgcaggcgctgtgcgcgttccggccgcccgatccgttcgtggccggcgcgatcgag
gtgacgccgctgcggccggtgacgcggcgcccgcgcctgcagcgccgtgcgccggcgcat
ccgctggccgagccaccggtctaccgcgccgccttcgatcgcgactgggcggtcggcagc
ttcaccgcgctggtgcgcgacctgaaggaggcgacggcttcgccgcggctcgaggcggac
gccgagagcgatgccgatgccgaggtctgggaccgctccggcctgccggcgctgttggcc
gatccgcgccgtcaggagcaggtgcgcgaggaatgggcggtgcagccgacgggcgatccc
gccgtcgagcctgcggccgagaccggggccgagccggcctggcaccgctttccgagcggt
ccgctgccgggcaacttcctgcacgagctgctgcagctgctggcgcaggagggcttcggc
tgtcgcaccgagccggcggtgcgctggatggcccagcggcgctgcaagcgggccggccac
ggcgagcgcaccgaggaggtgctggactggatggacgcggtgctggccgcgccgctgccg
ccgctgggcgggacgccgctgacgcagatcgtcacgttgctgccggagatggagttctgg
atgccgagccagcaactcgacagcatcgccttcgaccggttgtgccgccaggctctgctt
cctggccgcgatcgtcctgcactggtctcgcgccagcttgacggcatgctgatgggcttc
atcgacctggtcttcgagcacgagggccgctggtgggtgatcgactacaagtccaaccgc
ctgggcgagcgcgacgctgactacgaccgcgccacgctggagcgcgcggtgctggcccat
cgctacgagctgcagtccgtgctctacctgctggcgctgcaccggctgctgcgcagccgt
ctgggggcggactacgacccgcaggcccacctgggcggcgccatctgcctgttcctgcgt
ggcattcacggcccggagcggggctgcgtgctgctgcgcccgaccgccgagatgctcgat
gcgcttgatcgcacggtcggaccgctcccggacaatggatctcatgactcgatctga
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