KEGG   Sphaerotilus sulfidivorans: EWH46_12300
Entry
EWH46_12300       CDS       T06182                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
snn  Sphaerotilus sulfidivorans
Pathway
snn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:snn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EWH46_12300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:snn03019]
    EWH46_12300
Enzymes [BR:snn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     EWH46_12300
Messenger RNA biogenesis [BR:snn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     EWH46_12300
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA Utp25_C
Other DBs
NCBI-ProteinID: QEN01487
UniProt: A0A5C1Q1S9
LinkDB
Position
2746592..2748040
AA seq 482 aa
MTFDELGLAQPLLRAIREQGYDTPTPIQQQAIPAVLAGGDLLAGAQTGTGKTAGFTLPLL
HRLASSHPVKDSKGRWAIRALILTPTRELAAQVEESVRNYGKHLKLSSMVMFGGVGMGPQ
IDRLKRGVDILVATPGRLLDHHQQGTLDLSRVEFFVLDEADRMLDMGFVHDIKKVLAVLP
KQKQSLLFSATFSDEIKALAERLLNQPRVIEVARRNTTAETIAQRIITVGREKKKDLLIH
LIKSQDWHQVLVFTRMKHGANRLCEHLNKAGISAMAIHGNKSQGARTKALADFKSGELCV
LVATDIAARGIDIDQLPHVINYELPNVPEDYVHRIGRTGRAGAQGEALSLVCMDEEGFLA
DIEKLIKRSIPRETVAGFEAPAGERAEPIQIGRRTLNGGARGGGSQPGNGRGGRPGGAAG
APRAAGQPAGGAGQPRPAGGRGGQGAGGARPAARPASRPAAAAPQRPGGAGGSGRGGSGR
GH
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgacgtttgacgaactgggcctggcccagcccctccttcgcgccatccgcgaacaaggc
tacgacacccccaccccgatccagcagcaggcgattcccgcggttctcgccggcggcgat
ctgctcgccggcgcgcagaccggcaccggcaagacggcaggcttcacgctgccgctgctg
caccgcctggcctcgagccatccggtcaaggacagcaagggccgctgggcgatccgcgcg
ctgatcctcacccccacccgcgaactcgccgcccaggtcgaggagagcgtgcgcaactac
ggcaagcacctcaagctctcgagcatggtgatgttcggcggcgtcggcatgggcccgcag
atcgaccgcctcaagcgcggcgtcgacatcctggtggccacgccgggccgtctgctcgac
caccaccagcagggaacgctggacctgagccgcgtcgagttcttcgtgctcgacgaggcc
gaccgcatgctcgacatgggcttcgtgcacgacatcaagaaggtgctggcggtcctgccc
aagcagaagcagagcctgctgttctcggccaccttcagcgacgagatcaaggcgctggcc
gagcgactgctgaaccagccgcgcgtcatcgaggtggcgcgccgcaacaccaccgccgag
acgatcgcgcagcgcatcatcaccgtcggccgcgagaagaagaaggatctgctgatccat
ctgatcaagtcgcaggactggcaccaggtgctggtgttcacccgcatgaagcacggcgcc
aaccgcctgtgcgagcacctgaacaaggccggcatttccgcgatggcgatccacggcaac
aagagccagggcgcgcgcaccaaggcgctggccgacttcaagagcggcgagctgtgcgtg
ctggtggccaccgacatcgcggcgcgcggcatcgacatcgaccagctgccgcatgtcatc
aactacgagctgccgaacgtgcccgaggactatgtgcaccggatcggccgcaccggccgc
gccggcgcgcagggcgaggcgctgtcgctggtgtgcatggacgaggaaggcttcctcgcc
gacatcgagaagctgatcaagcgcagcattccgcgcgagacggtggccggcttcgaggcc
ccggccggcgagcgggccgagccgatccagatcggccggcgcacgctcaacggcggtgca
cgcggcggcggcagccagccgggcaacggccgcggcgggcgccccggcggtgcggcgggt
gcgccacgggcggcaggtcagccggccggcggtgctggtcagccgcgcccggcaggcggc
cgtggcggccagggtgccggtggcgcacgcccggcggcacgtccggcctcgcgtccggcc
gcggctgcgccgcagcgaccgggtggcgcaggcggatcgggccgcgggggctcaggccgc
ggccactga

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