Sphaerotilus sulfidivorans: EWH46_12300
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Entry
EWH46_12300 CDS
T06182
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
snn
Sphaerotilus sulfidivorans
Pathway
snn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EWH46_12300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snn03019
]
EWH46_12300
Enzymes [BR:
snn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EWH46_12300
Messenger RNA biogenesis [BR:
snn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EWH46_12300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QEN01487
UniProt:
A0A5C1Q1S9
LinkDB
All DBs
Position
2746592..2748040
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AA seq
482 aa
AA seq
DB search
MTFDELGLAQPLLRAIREQGYDTPTPIQQQAIPAVLAGGDLLAGAQTGTGKTAGFTLPLL
HRLASSHPVKDSKGRWAIRALILTPTRELAAQVEESVRNYGKHLKLSSMVMFGGVGMGPQ
IDRLKRGVDILVATPGRLLDHHQQGTLDLSRVEFFVLDEADRMLDMGFVHDIKKVLAVLP
KQKQSLLFSATFSDEIKALAERLLNQPRVIEVARRNTTAETIAQRIITVGREKKKDLLIH
LIKSQDWHQVLVFTRMKHGANRLCEHLNKAGISAMAIHGNKSQGARTKALADFKSGELCV
LVATDIAARGIDIDQLPHVINYELPNVPEDYVHRIGRTGRAGAQGEALSLVCMDEEGFLA
DIEKLIKRSIPRETVAGFEAPAGERAEPIQIGRRTLNGGARGGGSQPGNGRGGRPGGAAG
APRAAGQPAGGAGQPRPAGGRGGQGAGGARPAARPASRPAAAAPQRPGGAGGSGRGGSGR
GH
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttgacgaactgggcctggcccagcccctccttcgcgccatccgcgaacaaggc
tacgacacccccaccccgatccagcagcaggcgattcccgcggttctcgccggcggcgat
ctgctcgccggcgcgcagaccggcaccggcaagacggcaggcttcacgctgccgctgctg
caccgcctggcctcgagccatccggtcaaggacagcaagggccgctgggcgatccgcgcg
ctgatcctcacccccacccgcgaactcgccgcccaggtcgaggagagcgtgcgcaactac
ggcaagcacctcaagctctcgagcatggtgatgttcggcggcgtcggcatgggcccgcag
atcgaccgcctcaagcgcggcgtcgacatcctggtggccacgccgggccgtctgctcgac
caccaccagcagggaacgctggacctgagccgcgtcgagttcttcgtgctcgacgaggcc
gaccgcatgctcgacatgggcttcgtgcacgacatcaagaaggtgctggcggtcctgccc
aagcagaagcagagcctgctgttctcggccaccttcagcgacgagatcaaggcgctggcc
gagcgactgctgaaccagccgcgcgtcatcgaggtggcgcgccgcaacaccaccgccgag
acgatcgcgcagcgcatcatcaccgtcggccgcgagaagaagaaggatctgctgatccat
ctgatcaagtcgcaggactggcaccaggtgctggtgttcacccgcatgaagcacggcgcc
aaccgcctgtgcgagcacctgaacaaggccggcatttccgcgatggcgatccacggcaac
aagagccagggcgcgcgcaccaaggcgctggccgacttcaagagcggcgagctgtgcgtg
ctggtggccaccgacatcgcggcgcgcggcatcgacatcgaccagctgccgcatgtcatc
aactacgagctgccgaacgtgcccgaggactatgtgcaccggatcggccgcaccggccgc
gccggcgcgcagggcgaggcgctgtcgctggtgtgcatggacgaggaaggcttcctcgcc
gacatcgagaagctgatcaagcgcagcattccgcgcgagacggtggccggcttcgaggcc
ccggccggcgagcgggccgagccgatccagatcggccggcgcacgctcaacggcggtgca
cgcggcggcggcagccagccgggcaacggccgcggcgggcgccccggcggtgcggcgggt
gcgccacgggcggcaggtcagccggccggcggtgctggtcagccgcgcccggcaggcggc
cgtggcggccagggtgccggtggcgcacgcccggcggcacgtccggcctcgcgtccggcc
gcggctgcgccgcagcgaccgggtggcgcaggcggatcgggccgcgggggctcaggccgc
ggccactga
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