Ancylobacter novellus: Snov_0110
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Entry
Snov_0110 CDS
T01258
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
sno
Ancylobacter novellus
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Ortholog
Paralog
GFIT
Motif
Pfam:
Autotransporter
VacA_C
DUF8693
PATR
Motif
Other DBs
NCBI-ProteinID:
ADH87447
UniProt:
D7A0T7
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Position
101478..104981
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AA seq
1167 aa
AA seq
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MTRVKLGISSGRAAEAGNGRSGRTRHAALLATTAVIALAYASPVSAQTLWTGTNSNNWFD
PGNWSAGLPNNVTDAEVDNIAVNAPAVFAIGANARDLTIGNSAVGSLTVQGAGVLLTTNG
YIGRGLGSTGTVVVTGTDSVWANTGDFYVGDQGSGSLTIANGGQVISNDSFVGNVGSGLV
TVTGTDSTWTVTDPLIVGNFGSGMVNVDTGGTVETERVTVGAANGSEGFLDISGGTTSWI
ASSEFIVGEEGSGTVTVSDGATVESQTLAVGFGPTGFGQVTITGVGTTWTTTASTGIGSD
GVGHLLIEAGAAFNTVGVSLGTGSGTVTGAGSSLTASGQIFVGAGGESTFTVSDGASVTS
VGANIALGGTGTATVTSGANWTSSSTFIVGHSGLGTLNVTDGGTVNTLDSVLGRFAAGVG
ILNVEGEGASFVNTGNMGIGNEGTGALSVTAGGTAEAQSVLLGMEANSGGSASISGAGSS
LTSNEFLFVGLEGNGVMFVEDGAQVNSVVAGIGASTGGIGEATVSGATWLNSSDLFIGAD
GTGVLTIADGGRVEVGGAVEIAAGAGSSGTLNIGAGEGLAAAAPGTLAAGEIVFGPGTGA
IVFNHTSTNYQFSAGMTGTGTIDLFSGTTVLTGNSSGFTGATTLHGGTLAVNGTLGGTLD
VLAGRLQGTGTVGSTTIAGGAVIAPGNSIGTLNIAGNATFAAGSAYELELDPNSSNGDLI
HATGTVAIEGGTVEHIGLAGAYSPLRTYTIVTADGGVDGEFAAVTSDFAFLDPTLSYDPN
NVYLTLIRNDVDFGAVGLTPNQIATGNGTESLGLGNPLYDAVLGLSAAQARGAFDLLSGE
IHASAKSVLIDDSRFVREAAIDRVRAALGGVGASVSPVMAYGEGGPQSAAPTTDRFAIWG
QGFGSWGQIDGDGNAAQINSSTGGFFLGADAPIFETWRLGVIAGYSRTNFDVDARASSGS
SDNYPLGIYTGTQWGNLGFRSGLAYTWHEIDTSRSVAFPGFSESLTSSYDASTFQAFGEL
GYRIDVQAVAFEPFANVAYVSFDSDGFTEQWGAAALYAGGQTTDTTFTTLGLRVAAGLGL
AGADVTLRGTLGWRHAFGDVTPLSTQAFAGGDPFTIAGVPIAENAAVVEAGLDWNLTPQA
TLGVAYNGQLASDAQQNGFTARLTVEF
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgggtgaagctgggtatatcgagcggtcgggccgcggaggcgggtaacgggcgc
tcagggcgcacgcgtcatgcggcgctgctggcgaccaccgccgtcatcgcgctcgcctat
gcgtcgccggtgagcgcgcagacgctctggaccggcaccaattcgaacaactggttcgat
cccggcaactggagcgccggcctgcccaacaacgtcaccgacgccgaggtcgacaacatc
gcggtgaacgcgccggcggtgtttgccatcggcgccaatgcgcgcgatctcaccatcggc
aacagcgcggtcggctcgctgacggtgcagggtgccggtgtgctgctgaccaccaacggc
tatatcggccggggcctcggctccaccggcacggtggtcgtcaccggcaccgattccgtc
tgggcgaacaccggcgatttctatgtcggcgaccagggcagcggcagcctgaccatcgcc
aatggcggccaggtcatcagcaacgattccttcgtcggcaatgtcggctcgggcctggtg
acggtcaccggcacggattccacctggacggtcaccgatccgctgatcgtcggcaatttc
ggcagcggcatggtcaatgtcgacaccggcgggaccgtggagaccgagcgggtgactgtc
ggcgccgccaacgggtccgaaggcttcctcgacatcagcggcggcacgacgagctggatc
gcctccagcgaattcatcgtcggtgaggaaggcagcggtacggtcacggtctccgatggc
gccacggtggaatcgcagacgctcgctgtcggcttcggccctaccggcttcgggcaggtg
accatcaccggggtgggcaccacgtggacgacaaccgcctcgaccggcatcggcagcgat
ggcgtcggccatctgctcatcgaggccggcgcggcattcaataccgtcggcgtatccctc
ggcaccggttcgggcacggtcaccggcgcgggttcgagcctcacggcaagcggacagatc
ttcgtcggtgccggcggcgagagcacgttcaccgtatccgacggtgcgagcgtgacgagc
gtcggcgcgaacatcgcgctcggcggcaccggcaccgcgaccgtcaccagcggcgccaac
tggacgagcagctcgaccttcatcgtcgggcactccggtctcggcacgctcaatgtcacc
gatggcggcacggtgaacacgctggattccgtcctcggccgctttgccgccggcgtcggc
atcctgaacgtcgagggcgagggggcgagcttcgtcaacaccgggaacatgggcatcggc
aacgagggcaccggtgcgctgtcggtcacggccggcggcacggcggaggcgcagagcgtc
cttctcggcatggaagcgaactcgggtggcagcgcatccatcagcggcgccggctcgtcg
ctcaccagcaacgaattcctcttcgtcggcctcgaaggcaatggcgtgatgttcgtcgag
gacggcgcgcaggtaaattcggtggtggcgggcatcggcgcttcgaccggcggcatcggc
gaggcgacggtctccggcgcgacctggctgaacagcagcgatctcttcatcggcgccgac
ggcaccggcgtgctgaccatcgccgatggcggccgagtcgaggtcggcggtgcggtggag
atcgccgcgggcgcgggctcctccggcacgctgaacatcggcgccggcgaggggcttgcg
gctgctgccccgggcacgctcgcggcgggcgagatcgtcttcgggccgggcaccggcgcc
atcgtcttcaaccacacctcgacgaactaccagttctccgccggcatgaccggcaccggc
accatcgacctgttctccggcaccacggtgctgaccggcaattcgagcggctttaccggc
gcgacgacgctccatggcggcacgctggcggtgaacggcacgctcggcggcacgctggac
gtcctcgccggccgcctacagggcacgggcacggtcggctcgaccaccatcgccggcggc
gccgtcatcgcgcccggcaactccatcggtacgctgaacatcgccggcaacgcgactttc
gcagccggcagcgcttacgagcttgaactcgaccccaacagcagcaatggcgacctaatc
catgccaccggcaccgtcgccatcgagggcggcacggtggagcatatcggccttgccggc
gcctacagccccctgcgcacctataccatcgtcaccgccgacggcggcgtggacggcgag
ttcgcggcggtgacgtccgatttcgccttcctcgacccgacgctgagctacgacccgaac
aacgtctatctcacgctcatccgcaacgacgtcgatttcggcgcggtcggcctgaccccg
aaccagatcgccaccggcaatggcacggaaagcctcggtctcggcaatccgctctatgac
gcggtgctcggcctgtcggccgcgcaggcgcgcggtgccttcgacttgctatcgggcgag
atccacgcctcggccaagagcgtgctgatcgacgacagccgcttcgtccgcgaggcggcg
atcgaccgcgtgcgtgcggcgctgggaggcgtcggcgcctcggtctcgccggtgatggcc
tatggcgagggcgggccgcaatccgccgctccgaccaccgaccgcttcgccatctggggg
cagggcttcggctcctggggccagatcgacggcgacggcaacgcggcgcagatcaatagc
tcgaccgggggcttctttctcggcgccgacgcgccgatcttcgagacttggcggctcggc
gtcatcgccggctacagccggaccaatttcgacgtggacgcccgcgcctcctcgggcagc
agcgacaattacccgctcggcatctataccggcacgcagtggggcaatctcggcttccgc
tccggcctcgcctatacgtggcacgagatcgacaccagccgctccgtcgccttccccggc
ttcagcgagagcctgacgagcagctacgatgcctcgaccttccaggccttcggcgagctc
ggctaccgcatcgatgtgcaggctgtggcgttcgagcccttcgccaacgtcgcctatgtc
agcttcgacagtgacggcttcaccgagcaatggggtgccgcggcgctttatgccggcggg
cagaccaccgacaccactttcaccaccctcggcctgcgcgtcgcggccgggctcggcctc
gccggcgccgacgtcacgctgcgcggcacgctcggctggcgccacgccttcggcgacgtg
acgccgctctcgacgcaggctttcgccggcggcgatcccttcaccatcgccggcgtgccg
atcgcggagaatgccgccgtcgtcgaggcgggactcgactggaacctgacgccgcaggcg
acgctgggcgtcgcctataacggccaactcgcctccgacgcgcagcagaacggcttcacc
gcgcggctgacggtcgagttctga
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