Ancylobacter novellus: Snov_0581
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Entry
Snov_0581 CDS
T01258
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sno
Ancylobacter novellus
Pathway
sno03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Snov_0581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sno03400
]
Snov_0581
Enzymes [BR:
sno01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Snov_0581
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Snov_0581
DNA repair and recombination proteins [BR:
sno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Snov_0581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ADH87914
UniProt:
D7A494
LinkDB
All DBs
Position
complement(614235..615134)
Genome browser
AA seq
299 aa
AA seq
DB search
MPELPEVETVRRGLAPVMEGRRILAAVARRPDLRWPLPERFAERLTGRRIGRLGRRAKYL
VADIEPQDGAAPEVLVMHLGMSGSFRIEPDEGVPSVPGDFVMARSKTSAHDHVAFRMEGG
VEVVYNDPRRFGAMLLVPRAELDAHPLFRDIGPEPLGPGFNAESLAQALAGRRTPIKAAL
LDQKVVAGLGNIYVCEALHRAGLSPERQAASLVTATGKPTAATRRLVGIVREVLEEAIAA
GGSTLRDHAQVDGTLGYFQHTFRAYDREGEACLTPGCRGTIARLVQSGRSTFYCATCQR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttgcccgaagtcgaaaccgtccggcgcgggctcgcgccggtgatggaggga
cggcgcatcctcgccgccgtcgcccgccggccggacctgcgctggccgctgcccgagcgc
ttcgccgagcgactgactggccggcgcatcggccggcttggccgccgcgccaaatatctc
gtcgccgacatcgagccgcaggacggcgccgcgccggaggtgctggtcatgcatctcggc
atgtccggctccttccgcatcgagccggacgagggcgtgccctccgtccccggcgatttc
gtcatggcccgctccaagacatccgcccacgaccatgtggccttccgcatggagggcggc
gtcgaggtcgtctacaacgacccgcgccgcttcggcgccatgctgctggtgccgcgcgcc
gagctcgacgcgcacccgctgttccgcgacatcggccccgagccgctcggccccggcttc
aacgccgagagcctcgcccaggcgctggccggacggcgtacgccgatcaaggcggcgctg
ctcgaccagaaggtcgtggccgggctcggcaacatctatgtgtgcgaggcgctgcaccgc
gccggcctctcgcccgagcggcaggccgcgagcctcgtcaccgccacgggcaagccgacc
gccgccacgcgccggctggtcggcatcgtccgcgaggtgctggaggaggcgatcgccgcc
ggcggctcgacgctgcgcgaccatgcccaggtcgacggcacgctcggctatttccagcac
accttccgcgcctatgaccgcgagggcgaggcctgcctcacccccggctgccgtggcacc
atcgcccggcttgtgcagagcgggcgctccaccttttactgtgcgacatgccagcgatag
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