Ancylobacter novellus: Snov_1373
Help
Entry
Snov_1373 CDS
T01258
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sno
Ancylobacter novellus
Pathway
sno03410
Base excision repair
sno03430
Mismatch repair
sno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Snov_1373
03430 Mismatch repair
Snov_1373
03440 Homologous recombination
Snov_1373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sno03400
]
Snov_1373
DNA repair and recombination proteins [BR:
sno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Snov_1373
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Snov_1373
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Snov_1373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ATPgrasp_N
Motif
Other DBs
NCBI-ProteinID:
ADH88683
UniProt:
D7A8X8
LinkDB
All DBs
Position
1434665..1436485
Genome browser
AA seq
606 aa
AA seq
DB search
MSLNLPTAAPAPRAFLGVARSATGRFWRERLDLRGAQATLAIVQRTGVPEILARVLAGRG
VGIDEVEAWLDPTVKRLLPDPDTLTDMGPCVARLADAVTTGEKVAVFGDYDVDGATSTAL
LVEVLRAGGLDPAFYIPDRIFEGYGPNIPAIEGLAAGGASLLVPVDCGTMSFEPFARARE
LGLDVVVIDHHQAGETLPEVAALVNPNRVDDLSGLGHLCAVGLVFVVAVGLLRELEQRGW
WNAARPKPNLLADLDLVALGTVADVVPLLGLNRAYVTKGLLQLRKRERPGLTALMDAARL
SGPPKAWHLGFLLGPRINAGGRIGDAALGTRLLLTRDPIEAAAIAAELDRLNAERQQVER
AIVAQAEAEAEAALGRAGEGAVILSSGQGWHPGVVGLVAARLKEKFGRPAFAIAFTGESG
AGSARSIPGVDVGRAVRAAVELGILVKGGGHAMAAGLTVAREKLGELRAHLEEVLAVSVE
EARAVDETVIDGALSAAGATPDLVELIEKAGPFGAGNPQPIFAFPAHRIVYAEPGNSDQV
RVRLRGSDGTVLSGVAFRAANTPLGQALIAARGQQAHVAGMLELDSWQGRTQVNLRICDV
AMPEIG
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgaaccttcccaccgctgcgccggcgccgcgcgccttcctcggcgtggcgcgc
tcggccaccgggcgcttctggcgcgagcggctcgacctgcgcggcgcgcaggcgacgctc
gccatcgtgcagcgtaccggcgtgccggaaatcctcgcccgcgtgctcgccgggcgcggc
gtcggcatcgacgaggtcgaagcctggctcgacccgaccgtcaagcgcctgctgcccgat
ccggacacgctgaccgacatggggccttgcgtcgcccgcctcgccgacgccgtcaccacg
ggcgagaaggtcgcggtgttcggcgactacgatgtcgacggcgccacctccaccgcgctg
ctggtcgaggtgctgcgcgccggcgggctcgatcccgccttctacatcccggaccgcatc
ttcgagggctacgggccgaacatcccggccatagaggggctggcggcgggcggggcgagc
ctcctcgtccccgtcgattgcggcacgatgagcttcgagcccttcgcccgcgcccgcgag
ctcggcctcgacgtggtggtcatcgatcatcaccaggccggcgagaccctgcccgaagtc
gcggcgctggtgaatccgaaccgcgtcgacgacctctccggcctcggccatctctgtgcc
gtcggcctcgtcttcgtcgttgccgtcgggctgctgcgcgagcttgagcagcgcggctgg
tggaatgcggcgcgccccaagccgaacctgctcgccgacctcgatctcgtggcgctcggc
acggtggccgacgtggtgccgctgctcggcctcaaccgcgcctatgtgaccaagggcctg
ctccagctccgcaagcgcgagcgccccggcctgaccgcgctgatggacgctgcccggctc
tccggcccgcccaaggcgtggcatctcggcttcctgctcggcccgcgcatcaatgccggc
gggcgcatcggcgacgccgcgctcggcacgcgcctgctgctcacccgcgatcccatcgag
gccgccgccatcgctgccgagctcgaccggctgaacgccgagcgccagcaggtggagcgg
gccatcgtcgcgcaggccgaggcggaggccgaagccgcgctcggacgcgccggggagggg
gcggtgatcctctcctcggggcagggctggcatccgggcgtggtcgggctggtggcggcg
cggctgaaggagaagttcggccgcccggccttcgccatcgccttcaccggcgagagcggc
gccggttccgcccgctccatccccggcgtcgatgtcggccgcgccgtgcgggcggcggtc
gagctcggcatattggtgaagggcggcggccacgccatggccgctggtctgacggtcgcg
cgggaaaaactcggcgagctgcgtgcgcatctggaggaggtgctcgccgtctcggtcgag
gaggcgcgggcggtggacgagacggtgatcgacggcgcgctctccgccgccggggcgaca
cccgatctcgtggaactgatcgagaaggccgggccgttcggcgccggcaacccgcagccg
atcttcgcctttcccgcgcatcgcatcgtctatgccgagccgggcaattccgaccaggtg
cgcgtgcggctgcgcggctcggacggcacggtgctctccggcgtcgccttccgcgccgcc
aacacgccgctcggccaggcgctcatcgccgcgcgcggccagcaggcgcatgtcgccggc
atgctggagctcgattcatggcagggccgcacgcaggtgaacctgcgcatctgcgatgtc
gccatgccggaaatcggctga
DBGET
integrated database retrieval system
