Ancylobacter novellus: Snov_1472
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Entry
Snov_1472 CDS
T01258
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sno
Ancylobacter novellus
Pathway
sno03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sno00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Snov_1472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sno03021
]
Snov_1472
03400 DNA repair and recombination proteins [BR:
sno03400
]
Snov_1472
Enzymes [BR:
sno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Snov_1472
Transcription machinery [BR:
sno03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Snov_1472
DNA repair and recombination proteins [BR:
sno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Snov_1472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF4249
IDH
Motif
Other DBs
NCBI-ProteinID:
ADH88782
UniProt:
D7A977
LinkDB
All DBs
Position
1529435..1530451
Genome browser
AA seq
338 aa
AA seq
DB search
MIQKNWQELIKPEKLEVAVGSDPKRLATVVAEPLERGFGQTLGNALRRILLSSLQGAAVT
SVHIDGVLHEFSSIPGVREDVTDIVLNIKDIAIKMAGDGPKRMVVKKQGPGIVTAGDIQT
VGDVQVLNPELVLCTLDDGAEIRMEFTVDTGKGYVAGERNRPEDAPIGLIPVDSLYSPVK
KVSYKVENTREGQILDYDKLTMTIETNGSVSPEDALAFAARILQDQLEIFVNFEEPKRET
ESPAMQELPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLASMGLHLGMEVPGWPPENIEDLAKRFEDHY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgattcagaagaactggcaagagctgatcaagcccgagaagctcgaggtcgccgtaggc
agcgacccgaagcgcctcgcgaccgttgtcgccgagccgctggagcgtggcttcggccag
acactcggcaatgcgctgcgccgtattctgctgtcgtccctgcagggcgcggcggtgacc
tcggtgcatatcgacggcgtgctgcacgagttctcctcgatcccgggcgtgcgcgaggac
gtgaccgacatcgtcctcaacatcaaggacatcgccatcaagatggccggcgacggcccg
aagcggatggtggtgaagaagcagggtcccggcattgtcaccgccggtgacatccagacc
gtgggcgacgtgcaggtgctgaaccccgagctggtgctgtgcaccctcgacgacggcgcc
gagatccgcatggaattcaccgtcgataccggcaagggttatgtcgcgggtgagcgcaac
cgtcccgaggacgcgccgatcggcctcatcccggtcgacagcctctactcgccggtcaag
aaggtctcctacaaggtcgagaacacccgcgagggccagatcctcgactatgacaagctg
accatgaccatcgagaccaatggctcggtcagcccggaggacgcgcttgccttcgccgcg
cgcattctccaggaccagctcgaaattttcgtcaacttcgaggagcccaagcgcgagacg
gagagccctgcgatgcaggagctgccgttcaacccggcgctgctcaagaaggtggacgag
ctggagctttcggtccgttcggccaactgcctgaagaacgacaacattgtctacatcggc
gacttgatccagaagaccgaggcggagatgctccgtaccccgaacttcggccgcaagtcg
ctgaacgagatcaaggaagtcctcgcctccatgggcctgcacctcggcatggaagtgcct
ggctggccgccggagaacattgaggacctcgccaagcggttcgaagaccattactga
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