Ancylobacter novellus: Snov_1513
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Entry
Snov_1513 CDS
T01258
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sno
Ancylobacter novellus
Brite
KEGG Orthology (KO) [BR:
sno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sno03032
]
Snov_1513
03400 DNA repair and recombination proteins [BR:
sno03400
]
Snov_1513
Enzymes [BR:
sno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Snov_1513
DNA replication proteins [BR:
sno03032
]
Prokaryotic type
DNA Topoisomerases
Snov_1513
DNA repair and recombination proteins [BR:
sno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Snov_1513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
CARME
Motif
Other DBs
NCBI-ProteinID:
ADH88823
UniProt:
D7A9P7
LinkDB
All DBs
Position
complement(1568566..1571205)
Genome browser
AA seq
879 aa
AA seq
DB search
MQVVIVESPAKAKTINKYLGPGYEVIASYGHVRDLPAKDGSVDPEHDFHMLWDIDPKAQK
RLSDIARAVKGADGLILATDPDREGEAISWHVLEILKEKRALKDQPISRVVFNAITKQAV
LDAMAHPRTIDAALVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
EREIETFVKREYWSIAATLATPRNETFEARLVGADGKKITRLDVGTEAEATDFRKALESA
DFKVRSVEAKPARRHPYPPFTTSTLQQEASRKLGLAPAVTMRIAQRLYEGVDVGGETVGL
ITYMRTDGVDMAPEAVAQARSVIGRDYGDRYVPNAPRKYTAKAKNAQEAHEAVRPTDLSR
RPKDVSRHLEPEQAKLYELIWLRTVASQMESAELERTTVDIDAKAAGRALELRATGQVVK
FDGFLTLYREGIDDGDEDEENRRLPAMSTGEALANKGIKADQHFTEPPPRYSEASLVKRM
EELGIGRPSTYASVLAVLRDREYVKLDKRRLVPEDKGRLVTAFLESFFDRYVEYDFTADL
EEKLDLISNGELAWKDVLRDFWRDFTAAVGETKELRVSDVISALDEMLTAHIFPPKEDGS
DPRICPTCGTGRLSLKVGKFGAFIGCSNYPECKYTRPLAVQNGDSDNPAEANGTRVLGTD
PVSGLEVTVRDGRFGAYLQLGEAKDGEKPKRSSLPKGLAPADVDLETGLALLSLPREIGV
HPDNGEPILAGIGRFGPYVQHGRTYANLEAGDDVLSIGLNRAVALIADKQNKGPGRGRGA
VGGRELGEHPTLGGQVTVRPGRFGAYVNHGKVNATLPKSMPAESVTLEQAVELITAKAGS
APAKPARRAAAKTASGDKPAKKAAPKKAAAKKSPAKKSG
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcgtcatcgtcgaatcgcctgcgaaggcgaagacgatcaacaaatatctcggg
ccgggctacgaggtcatcgcctcgtatggccatgtgcgcgatctccccgccaaggacggc
tccgtcgatcccgagcacgacttccatatgctctgggacatcgaccccaaggcgcagaag
cgcctgtccgacatcgcccgggcggtgaagggtgccgacggcctcatcctcgccaccgac
cccgaccgcgagggcgaggcgatctcctggcatgtgctggagatcctgaaggagaagcgc
gcgctcaaggaccagccgatctcgcgcgtcgtcttcaacgccatcaccaagcaggcggtg
ctggatgcgatggcgcacccgcgcaccatcgacgcggcactggtcgacgcctatctcgcc
cgccgcgcgctggactatctcgtcggcttcaccctctccccggtgctgtggcgcaagctg
ccgggcgcccgatcggcggggcgcgtgcagtcggtggcgctgcgcctcgtctgcgaccgc
gagcgtgagatcgagaccttcgtcaagcgcgagtactggtcgatcgccgcgacgttggcg
acgccgcgcaacgagaccttcgaggcccgcctcgtcggcgccgacggcaagaagatcacc
cggctggacgtcggcaccgaggccgaggcgacggatttccgcaaggcgttggaatcggcc
gacttcaaggtgcgctcggtcgaggccaagcccgcccggcgccacccctacccgcccttc
accacctcgacgctgcagcaggaagccagccgcaagctcggcctcgccccggccgtgacc
atgcgtatcgcgcagcgcctctatgaaggcgtcgacgtcggcggcgagactgtcggcctc
atcacctatatgcgtaccgacggcgtcgacatggcgccggaggcggtggcgcaggcgcgc
tcggtgatcggccgcgactatggcgaccgctacgtgccgaatgcgccgcgcaagtatacg
gccaaggcgaagaacgcgcaggaagcccatgaggcggtccgcccgaccgatctttcccgc
cggccgaaggacgtctcccggcatctcgagcccgagcaggcgaagctctacgagttgatc
tggctgcgcaccgtcgccagccagatggaatcggccgagttggagcgcaccaccgtcgat
atcgacgccaaggctgccggccgcgcgctggagctgcgcgccaccggccaggtggtgaag
ttcgacggcttcctcaccctctaccgcgagggcatcgacgacggcgacgaggacgaggag
aaccgtcgcctgcccgccatgtcgaccggcgaggcgttggccaacaagggcatcaaggcc
gaccagcacttcaccgagccgccgccgcgctattcggaagcctcgctggtcaagcgcatg
gaggagctcggcatcggccgtccctccacttatgcctccgtgctcgccgtgctgcgcgac
cgcgaatatgtgaagctcgataagcgccgcctcgtgcccgaggacaagggccgccttgtc
acggcgttcctcgagagcttcttcgaccgctatgtcgaatacgacttcaccgcggacctc
gaggagaagctcgacctcatctccaatggcgagctcgcctggaaggacgtgctgcgcgac
ttctggcgcgacttcaccgccgccgtcggcgagaccaaggaactgcgcgtctccgacgtc
atctccgcgctcgacgagatgctcaccgcccatatcttcccgcccaaggaagacggctcg
gatccgcgcatctgcccgacctgcggcaccgggcggctgtcgctgaaggtgggcaagttc
ggcgccttcatcggctgctcaaactatcccgaatgcaagtacacccgcccgctggcggtg
cagaacggcgattccgacaacccggcagaggcgaacggcacccgcgtgctcggcaccgac
cccgtgagcgggctcgaagtcaccgtgcgcgacgggcgcttcggcgcctatctccagctc
ggcgaggccaaggacggcgagaagcccaagcgctccagcctgcccaagggcctggcgccg
gcggacgtggatctggagacgggcctcgctttgctctcgctgccgcgcgagatcggcgtc
catcccgacaatggcgagccgatcctcgccggcatcggccgcttcggtccctatgtgcag
cacggccggacctacgcgaatctcgaagccggcgacgacgtgctctccatcggcctcaac
cgggccgtcgcgctgatcgccgacaagcagaacaagggtccgggccgcggccgcggcgcc
gtcggcgggcgcgagctgggcgagcatcccactctcggcgggcaggtgacggtgcggccc
ggccgcttcggcgcctatgtgaaccacggcaaggtcaacgccacgctgcccaagagcatg
ccggcggagagcgtgacgttggaacaggcggtcgagctgatcaccgccaaggccggctcc
gcgcccgccaagccggcgcgccgcgcggcggcgaagacggcaagcggcgacaagcccgcc
aagaaggcggcgccgaagaaggccgcggcgaagaagtcacctgcaaagaagagcggctaa
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