Ancylobacter novellus: Snov_1840
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Entry
Snov_1840 CDS
T01258
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sno
Ancylobacter novellus
Pathway
sno03030
DNA replication
sno03430
Mismatch repair
sno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Snov_1840
03430 Mismatch repair
Snov_1840
03440 Homologous recombination
Snov_1840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sno03032
]
Snov_1840
03400 DNA repair and recombination proteins [BR:
sno03400
]
Snov_1840
Enzymes [BR:
sno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Snov_1840
DNA replication proteins [BR:
sno03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Snov_1840
DNA repair and recombination proteins [BR:
sno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Snov_1840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
ADH89144
UniProt:
D6ZYN2
LinkDB
All DBs
Position
complement(1924437..1927886)
Genome browser
AA seq
1149 aa
AA seq
DB search
MAQQDMTQADAGFVHLHVHSSFSLLEGALTIGKLAELAKKDRQPAIALTDTGNLFGALEF
SEKMAGSGIQPILGCALSVDFPGPAPRGPAGQQRPRVVLLAMSEEGWKNLMELVSRSFLD
TASDGAPHIKLDWLEGRTGGLIALTGGPSGPIDRALAAGSHDQAEQRLHTLAELFGDRLY
VEIQRHGVAEERRVETALIELAYRLDLPLVATNEPFFAGQDDYEAHDALICIAEGRLVAE
GDRRQLTPEHRFRTRAEMMALFADLPEALANTVEIARRCAYRPRTVKPILPRFTMERDEA
EELRVQAEEGLRKRLAVHGPAPGLAEKDYEDRLAFELSIIEKMKFPGYFLIVSDFIKWAK
AQGIPVGPGRGSGAGSLVAYSLTITDLDPLRFGLLFERFLNPERVSMPDFDIDFCQERRD
EVIRYVQQRYGRDQVAQIITFGTLQARGVLRDVGRVLEMPYGQVDKLCKLVPQNPANPVT
LTQAIEGEPRLQAESEQNPVVKRAFDIATKLEGLNRHASTHAAGIVIGDRKLSNLVPLYR
DPRSDMPVTQYNMKWVEQAGLVKFDFLGLKTLTVLQTAVRLVAQLGIQLDLSTIPLNDEK
TYAMLTRGETVGVFQVESSGMRRALVDMKPDRLEDIIALVALYRPGPMANIPVYCAVKNG
HEQAVYAHPALESSLKETYGVIIYQEQVMQIAQTLSGYSLGEADLLRRAMGKKIRAEMDK
QRERFVSGAVERGVAKAKASEIFDLLAKFADYGFNKSHAAAYALVSYQTAYMKANYATEF
LAASMTLDMGNTDKLAEFRQEAQRLGIEVVPPSVNHSGREFAVKEGRILYALAAIKGVGV
HAVEAIVEARGDRPFASLSDFAARINAKALNKRTMESLVNAGAFDALEPNRARAAAAIDS
ILAHAASVGAEAAIGQGNMFGGPAAATELPIPNATPWLPAEKLQREYDAIGFFLTGHPLD
EYGKALDRLRVQRWSDFTRSVRAGSIAGRLAATVVSRQERRTKTGNKMGIVGLSDPSGQF
EAVLFSETLAQFRELLEPGKALLLQVSAEMQGEDVRARIQTAEPLDEAASKMQKGMRIFL
RSPDPLDSVASRLGSLAGGRGDGEVALVLLLGESGATEVELKLPGRYSLSPQIAGALKAV
PGVVQVEMA
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaggacatgacgcaggccgatgccgggttcgtccatctgcacgtccattcc
tccttctcgctgctggaaggcgcgctcaccatcggcaagctggccgagctcgccaagaag
gaccgccagcccgccatcgcgctgaccgacaccggcaatctgtttggcgcgctggaattc
tcagagaagatggccggcagcggcatccagccgatcctcggctgcgcgctcagcgtggat
ttccccggcccggcgccgcgcggccccgccggccagcagcgcccgcgcgtcgtcctgctg
gcgatgagcgaggagggctggaagaacctgatggagctggtctcccgctccttcctcgac
accgcctccgacggcgcgccgcacatcaagctcgactggctggaaggccgcaccggcggg
ctcatcgccctgactggcggcccttccgggcccatcgaccgcgcgctcgccgccggcagc
cacgaccaggccgagcagcggctgcacacgcttgccgaactcttcggcgaccggctctat
gtcgagatccagcgccacggcgtcgccgaggagcggcgcgtcgagacggcgctgatcgaa
ctcgcctacaggctcgatctgccgctggtggcgaccaacgagccgttcttcgccggccag
gacgactacgaggcgcatgacgcgctgatctgcatcgccgagggccggctggtggcggaa
ggcgaccggcgccagctcacccccgagcaccgcttccgcacccgcgccgagatgatggcg
ttgttcgccgacctgccggaggcgctcgccaacaccgtcgagatcgcccggcgctgcgcc
tatcgcccgcgcacggtgaagccgatcctgccgcgcttcaccatggagcgcgacgaggcc
gaggaactgcgggtgcaggcggaggagggccttcgcaagcgcctcgccgtccatgggccg
gcgccggggctcgccgagaaggactatgaggaccggctggccttcgaactctcgatcatc
gagaagatgaaatttcccggctatttccttatcgtgtctgactttatcaaatgggcgaag
gctcagggcattcctgtcggtccgggccgcggctcgggcgccggctcgctggtcgcctat
tcgctgaccatcaccgacctcgacccgctgcgcttcggcctgctgttcgagcgtttcctg
aaccccgagcgcgtgtcgatgccggacttcgacatcgacttctgccaggaacgccgtgac
gaggtgatccgctacgtgcagcagcgctacgggcgcgatcaggtggcgcagatcatcacc
ttcggtacgctccaggcgcgcggcgtgctgcgcgacgtcggccgcgtgctggagatgccc
tacggccaggtcgacaagctctgcaagctggtgccgcagaacccggccaacccggtgacg
ctgacgcaggccatcgagggcgagccgcgcctccaggccgagagcgagcaaaacccggtg
gtgaagcgcgccttcgacatcgccaccaagctcgaagggctgaaccgccacgcctcgacc
cacgccgccggcatcgtcatcggcgaccgcaagctctccaacctcgtcccgctctaccgc
gatccgcgctccgacatgccggtcacgcagtacaacatgaagtgggtcgagcaggccggg
ctggtgaagttcgacttcctcggcctgaagacgctgaccgtcttgcagacggcggtgcgc
ctcgtcgcgcagctcggcatccagctcgatttgtcgaccatccccctgaacgacgagaag
acctacgccatgctgacccgcggcgagacggtcggcgtgttccaggtggaaagctcaggg
atgcggcgcgcgctggtcgacatgaagcccgaccggctggaggatatcatcgccctcgtc
gcgctctaccggccgggcccgatggccaacatcccggtctattgcgcggtgaagaacggc
catgagcaggcggtctacgcgcatcccgcgctggagagcagcctcaaggagacctacggc
gtcatcatctaccaggaacaggtgatgcagatcgcgcagacactgtcgggctattcgctc
ggcgaagccgacttgctgcgccgcgccatgggcaagaagatccgcgccgagatggacaag
cagcgcgagcgcttcgtctccggcgcggtggagcgcggcgttgccaaggccaaggcctcg
gagatcttcgacctgctggcgaagttcgccgactacggcttcaacaaaagccacgcggcg
gcctatgcgctggtctcgtaccagaccgcctatatgaaggcgaactacgccaccgaattc
ctcgccgcctcgatgacgctcgacatgggcaacaccgacaagctggcggaattccgccag
gaggcgcagcggctcggcatcgaggtggtgccgccctcggtcaaccattccggccgcgag
ttcgcggtgaaggaggggcgcatcctctacgcgctcgccgccatcaagggcgtcggcgtg
catgcggtggaggccatcgtcgaggcccgtggcgaccggcccttcgccagcctttcggac
ttcgccgcgcgcatcaacgccaaggcgctgaacaagcgcaccatggagagcctggtgaat
gccggcgccttcgacgcgctggagccgaaccgggcccgcgcggcggcggcgatcgattcc
atcctcgcccatgcggcctcggtcggggcggaggcggcgatcggccagggcaacatgttc
ggcgggcccgccgcggcgacggaattgccgatccccaacgccacgccctggctgccggcg
gagaagctccagcgcgaatatgacgccatcggcttcttcctcaccggccatccgctcgac
gagtacggcaaggcgctggaccggctgcgggtgcagcgctggagcgacttcacccgctcg
gtgcgtgccggctccatcgccgggcgcctcgcggccacggtggtgagccggcaggagcgg
cgcaccaagaccggcaacaagatgggcatcgtcggcctgtccgacccttcgggccagttc
gaggcggtgctgttctccgagacgctggcgcagttccgcgagctgctggagcccggcaag
gcgctgctgttgcaggtctccgccgagatgcagggcgaggatgtgcgcgcccgcatccag
accgccgagccgctcgacgaggcggcctccaagatgcagaagggcatgcgcatcttcctg
cgctcgcccgatccgctcgacagcgtcgcctcgcgcctcggctcgctcgccggcgggcga
ggggacggggaggtggccctcgtgctgctgctcggcgagagcggggcgaccgaggtggag
ctgaagctgcccggccgctacagcctctcgccccagatcgccggtgcgctcaaggcggtg
ccgggcgtggtgcaggtcgagatggcctag
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