Ancylobacter novellus: Snov_2581
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Entry
Snov_2581 CDS
T01258
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sno
Ancylobacter novellus
Pathway
sno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Snov_2581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sno03019
]
Snov_2581
03400 DNA repair and recombination proteins [BR:
sno03400
]
Snov_2581
Enzymes [BR:
sno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Snov_2581
Messenger RNA biogenesis [BR:
sno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Snov_2581
DNA repair and recombination proteins [BR:
sno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Snov_2581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADH89876
UniProt:
D7A4L3
LinkDB
All DBs
Position
2703932..2705767
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AA seq
611 aa
AA seq
DB search
MNAPVTSLGLLPPEMEQLKRARLQDVFGFDRFRPGQQDVVDSVLAGVPTLAVMPTGAGKS
LCYQLPALVLGGLSIVVSPLIALMDDQVNALKLQGVAAEAIHSGKSREDNVAIWRRVAAG
EVRLLYLAPERLLTERMLAALSRLTLGLVAVDEAHCISQWGHSFRGEYLGLGKLREIFPG
IPLVALTATADKATRDDIVERLFGGQARVFVSGFDRPNIFIGVEAKKDPARQIEGFVRAR
AGVSGIVYRISRKKVEETAERLSAAGIRALPYHAGLTPEVRAANQEVFLAEDGIVMVATV
AFGMGIDKSDVRYVLHADAPGTLEAYYQEIGRAGRDGAPAEAQLLYSASDIATRRRFLDE
EPSPPERKMVEARRLDAMVGFCEAVTCRRAVLLGYFGERAKACGTCDVCRDPPQVVDASR
DAQLVLRLVRATGERYGAAYIASVVTGQRTDQIAARGHDRLADFGTGADKPATEWRALLR
QLVATGALHADPERFGALTLTEAGVSVLGGTRAVTLRAPSRAKRQRFARSESGPELAPAE
AALLGKLKALRRELAAERNVPAYVVFADRTLEEMAVEHPRTRTELAGIKGVGAAKLEAFG
IAFLKILKEFS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccccgtgacctcgctcggcctgctgccgccggaaatggagcagctgaagcgc
gctaggctgcaggacgtgttcggcttcgaccgcttccgccccggccagcaggacgtggtg
gattcggtgctcgccggcgtgccgacgctggcggtgatgccgaccggcgcgggcaagtcg
ctgtgctaccagctccccgcgctggtgctgggcgggctctccatcgtcgtctcgccgctg
atcgcgctgatggacgaccaggtgaacgcgctgaaattgcagggcgtcgccgccgaggcc
atccattctgggaagtcccgcgaggacaacgtcgccatctggcgccgcgtggcggcgggc
gaggtgcgcctgctctatctcgcgcccgagcggctgctgaccgagcgcatgctggcggcg
ctgtcccgcctcaccctcggcctcgtggcggtggacgaggcgcactgcatctcgcaatgg
gggcatagcttccgcggcgaatatctcggcctcggcaagctgcgcgagatcttccccggc
atcccgctggtggcgctcaccgccaccgccgacaaggcgacgcgcgacgacatcgtcgag
cggctgttcggcgggcaggcacgggtcttcgtctccggcttcgaccggccgaacatcttc
atcggcgtcgaggcgaagaaggacccggcgcggcagatcgagggcttcgtgcgggcgcgc
gccggcgtctccggcatcgtctaccgcatctcccgcaagaaggtggaggagaccgccgag
cgcctttccgccgccggcattcgcgcgctgccctatcatgccggcctcacgcccgaggtc
cgcgcggccaatcaggaggtcttcctcgccgaggacggcatcgtcatggtggccaccgtc
gccttcggcatgggcatcgacaagtccgacgtgcgctacgtgctgcacgccgacgcgccg
ggcacgctggaggcctattaccaggaaatcggccgcgccggccgcgacggcgccccggcc
gaggcgcagctgctctattccgccagcgacatcgccacccgccgccgcttcctcgacgag
gagccctccccgcccgagcgcaagatggtggaggcccgccgtctcgacgccatggtcggc
ttctgcgaggcggtgacctgccggcgcgcggtgctgctcggctatttcggcgagcgcgcc
aaggcctgcggcacctgcgacgtctgccgcgacccgccgcaggtggtcgacgcctcgcgc
gacgcccagctcgtgctgcgcctggtgcgggcgaccggcgagcgctatggcgcggcctat
atcgcctccgtcgtcaccggccagcgcaccgaccagatcgccgctcgcggccacgaccgg
ctggccgatttcggcaccggcgccgacaagccggcgaccgaatggcgcgccttgctgcgc
cagctcgtcgccaccggcgcgctgcatgccgaccccgaacgcttcggcgcgctgaccctc
accgaggccggcgtctccgtgctcggcggcacccgcgccgtcaccctgcgcgcgccctcg
cgcgccaagcgccagcgcttcgcccgttcggaaagcgggccggagctggcgccggccgag
gcggcgctgctcggcaagctcaaggcgctgcgccgcgagctcgccgccgagcgcaacgtg
ccggcctatgtggtcttcgccgaccgcacgctggaggagatggcggtagagcacccgcgc
acgcgcaccgaactcgccgggatcaagggcgtcggcgccgccaagctggaagccttcggc
atcgcctttcttaagattctcaaagaattctcttag
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