Ancylobacter novellus: Snov_3875
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Entry
Snov_3875 CDS
T01258
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sno
Ancylobacter novellus
Pathway
sno03030
DNA replication
sno03410
Base excision repair
sno03420
Nucleotide excision repair
sno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Snov_3875
03410 Base excision repair
Snov_3875
03420 Nucleotide excision repair
Snov_3875
03440 Homologous recombination
Snov_3875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sno03032
]
Snov_3875
03400 DNA repair and recombination proteins [BR:
sno03400
]
Snov_3875
Enzymes [BR:
sno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Snov_3875
DNA replication proteins [BR:
sno03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Snov_3875
DNA repair and recombination proteins [BR:
sno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Snov_3875
NER (nucleotide excision repair)
GGR (global genome repair) factors
Snov_3875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Transposase_20
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ADH91145
UniProt:
D6ZZF0
LinkDB
All DBs
Position
complement(4102538..4105483)
Genome browser
AA seq
981 aa
AA seq
DB search
MPEHDPLEAGDHVVLIDGSAYIFRAYHALPPLTRPSDKLPVGAVAGFCNMLWKLVRAQGF
SPAPTHLAVVFDKSEQTFRKDIYPLYKAQRPDLPEDLIPQFPLIREATRAFDLACVEQDK
YEADDLMATYAELAKAKGALVTIISSDKDLMQLVEGSRVRMYDPMKDRAIGVEEVFEKFG
VGPEKVVDVQSLAGDSVDNVPGVPGIGIKTAAQLLAEYGDLDTLLARAEEIKQTKRRENL
IEFADQARLSRELVTLKRDVPLEVPLDDIAVVEPEGKKLIAFLKAMEFNTLTRRVAETYE
IEAAAIEPDSGLKAGGHESDELRAGLDPDTDRSAIPEGIEPPAPGESGLTPQALSAARIK
EATATPVDRSKYETVTTLERLKEWVARAFDLGFVAVDTETTGLDPMQADIVGFSLATAPN
EACYVPLSHKGGDEGLFSEGLLPDQIPIPDAVAAIKPLMEHPGVLKIGQNLKYDWLILKR
LGIELGPYDDTMLVSYVLDAGASPHGMDPLSMRWLGHTPIKFEEVCGKGKGQICFDRAAI
DKATDYAAEDADVTLRLWRVLKPRLAAEGKTTVYETLERPLVTVLAQMEERGITIDRQML
SRLSGEFAQGMGRLEAEISEMAGETFNPGSPKQLGDILFGKMQIPGGRKTPTGAWSTGAD
VLEELAEQGHELPRRILDWRQLQKLKSTYTDALPTYVNKETGRVHTSFALAATTTGRLSS
SEPNLQNIPVRTEEGRKIRKAFIAAPGHKLVSADYSQIELRLLAEIADTPSLRQAFQDGL
DIHAMTASEMFGVPVEGMPGEVRRRAKAINFGIIYGISAFGLANQLSIPREEAGAYIKRY
FERFPGIRAYMDETRNFAREHGYVETLFGRRCHYPDISAKNPSIRAFNERAAINARLQGS
AADIIRRAMARMDAALEKAGLSARMLLQVHDELIFEVPDDEIAATIPVVRETMELAPFPA
VALKVPLKVDARAAENWDEAH
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagcacgaccctctggaagccggcgaccacgtcgtcctgatcgacggctccgcc
tacatcttccgcgcctatcacgcgctgccgccgctcacccgtccgtcggacaagctgcct
gtcggcgcggtggcggggttctgcaacatgctgtggaagctggtgcgggctcaaggattc
tcgccggccccgacccatctcgccgtcgtgttcgacaagtccgagcagaccttccgcaag
gacatctacccgctctacaaggcgcagcgccctgacctgcccgaggacctgatcccgcaa
ttcccgctgatccgcgaggccacccgcgcgttcgacctcgcctgcgtcgagcaggacaag
tacgaggccgacgatttgatggcgacctatgccgaactcgccaaggccaagggcgcgctc
gtcaccatcatctcctccgacaaggacctgatgcagctcgtggaaggctcccgcgtgcgc
atgtacgacccgatgaaggaccgcgccatcggcgtcgaggaagtgttcgagaagttcggc
gtcgggccggagaaggtggtcgacgtgcagtcgctcgccggggattccgtcgacaacgtg
ccgggcgtgccgggcatcggcatcaagaccgcggcgcagctcctcgccgaatatggcgac
ctcgacacgctgctggcccgcgccgaggagatcaagcagaccaagcggcgcgagaacctg
atcgagttcgccgaccaggcacgcctctcgcgcgaattggtgacgctgaagcgcgacgtg
ccgctggaggtgccgctcgacgacatcgccgttgtcgagcccgaaggcaagaagctcatc
gccttccttaaggcgatggagttcaacacgctcacccgccgcgtcgccgagacctatgag
atcgaggccgccgccatcgagcccgattccgggctgaaggcgggcggccacgaaagcgac
gagctgcgcgccggcctcgacccggacaccgacaggtcggccatccccgagggcatcgag
ccccccgcgccgggcgaaagcgggctcaccccgcaggcgctctcggccgcgcgcatcaag
gaggccaccgccaccccggtcgaccgctcgaaatacgagacggtgaccacgctggagcgg
ctgaaggaatgggtcgcccgcgccttcgacctcggctttgtcgcggtcgacaccgagacc
accgggctcgacccgatgcaggcggacattgtcggcttctcgctggcgaccgcgccgaac
gaggcctgctacgtgccgctcagccacaagggcggcgacgagggcctgttcagcgagggg
ctgctgccggaccagatcccgatccccgacgccgtcgccgccatcaagccgctgatggag
catcccggcgtgctcaagatcggccagaacctcaaatatgactggctgatcctcaagcgc
ctcggcatcgagctcgggccttacgacgacaccatgctcgtctcctatgtgctcgacgcc
ggcgcctcgccgcacggcatggacccgctctccatgcgctggctcggccatacgccgatc
aagttcgaggaggtgtgcggcaagggcaaggggcagatctgcttcgaccgcgccgccatc
gacaaggcgaccgactatgcggcggaggacgccgacgtcacgctgcggctgtggcgggtg
ctgaaaccccgcctcgccgccgagggcaagaccacggtctacgagacgctggagcgcccg
ctggtcaccgtgctcgcgcaaatggaagagcgcggcatcaccatcgaccggcagatgctc
tcgcgcctctccggcgagttcgctcaaggcatgggccggctggaggcggagatctccgag
atggccggggagaccttcaaccccggctcgcccaagcagctcggcgacatattgttcggc
aagatgcagatccccggcgggcgcaagaccccgaccggggcgtggtcgaccggcgccgac
gtgctggaggagctggccgagcaaggccacgagctgccgcgccgcatcctcgactggcgc
cagctccagaagctcaaatccacctataccgacgcgctgcccacttacgtgaacaaggag
accgggcgcgtccacacctccttcgcgctcgccgccaccaccacggggcggctctcctcc
tccgagccgaacctgcaaaacatcccggtgcgcaccgaggaaggccgcaagatcagaaaa
gccttcatcgctgcgcccggccacaagctggtctcggccgactattcgcagatcgagctg
cgtctcttggccgagatcgccgacacgccgtcactgcggcaggccttccaggacgggctc
gatatccatgcgatgacggcgtcggagatgttcggcgtgccggtggaaggcatgccgggc
gaggtgcgccggcgggcgaaggccatcaatttcggcatcatctacggcatctcggcgttt
ggtttggctaaccagctctccattccccgcgaggaggccggcgcctacatcaagcgctat
ttcgagcgcttccccggcatccgcgcctatatggacgagacgcgcaacttcgcccgcgag
cacggctatgtggagacgctgttcggccggcgctgccactacccggacatatcagccaag
aacccgtccatccgcgccttcaacgagcgggcggcgatcaatgcaaggctacaaggctcg
gccgccgacatcatccgccgcgccatggcgcgcatggacgcggcgctggagaaggccggc
ctttccgcgcgcatgctgctgcaggtgcatgacgagctgatcttcgaggtgcccgacgat
gagatcgccgccaccatccccgtggtgcgcgagaccatggagctggcgccgttccccgcc
gtggcgctgaaggtgccgctgaaggtcgacgcccgcgccgcggagaactgggacgaggcg
cactga
DBGET
integrated database retrieval system
