Ancylobacter novellus: Snov_3876
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Entry
Snov_3876 CDS
T01258
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sno
Ancylobacter novellus
Brite
KEGG Orthology (KO) [BR:
sno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sno03016
]
Snov_3876
Enzymes [BR:
sno01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Snov_3876
Transfer RNA biogenesis [BR:
sno03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Snov_3876
Prokaryotic type
Snov_3876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF8159
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ADH91146
UniProt:
D6ZZF1
LinkDB
All DBs
Position
4105839..4106591
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AA seq
250 aa
AA seq
DB search
MPRYKLTIEYDGTPFVGWQIQAEGTSVQGALAQAVTRLTGEQVAVHGAGRTDAGVHATGQ
VAHVELSRDWRPDTVRDALNAHLRPHPIAVLSAERAADDFHARFSATGRRYVYRIIARRP
DLALERNRAWRVLRPLDVAGMAEGAARLVGRHDFTTFRAVGCQAASPLKTLDRLEVEEVA
LEGPGMEIRVHAAARSFLHHQVRSMVGTLVKVGEGAWTPDDVTAALEAKDRTRCGPMAPS
AGLYLAEVTY
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgccccgctacaagctcaccatcgaatatgacggcacgcccttcgtcggctggcagatc
caggccgaggggacgagcgtgcagggcgcgctggcgcaagccgtgacgcgcctcacgggc
gagcaggtcgcggtgcatggcgccggacggacggatgccggcgtgcacgccaccgggcag
gtggcgcatgtcgagctctcccgcgactggcgcccggacacggtgcgcgacgcgctgaac
gcgcacttacgcccgcaccccatcgctgtgctgtccgccgagcgtgcggcggacgatttc
cacgcgcgcttctccgccaccggccgacgctatgtctatcgcatcatagcgcggcggccc
gacctcgctttggagcggaaccgcgcgtggcgggttctgcgcccgctcgatgtcgcgggg
atggcggagggcgcggcccgcctcgtcggccggcacgacttcaccaccttccgcgcggtg
ggctgccaggcggcctcgccgctgaagacgctggaccggctggaggtcgaagaggtcgcg
ctggaagggccgggcatggagatccgcgtccacgccgccgcgcggtccttcctgcaccac
caggtgcgctccatggtcggcacgctggtgaaggtaggcgaaggcgcctggacgcccgac
gacgtcaccgccgctttggaggcgaaggaccgcacgcgctgcggcccgatggcgccgtcg
gcggggctgtatctggcggaagtgacctactag
DBGET
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