Ancylobacter novellus: Snov_3897
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Entry
Snov_3897 CDS
T01258
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sno
Ancylobacter novellus
Pathway
sno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Snov_3897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sno03019
]
Snov_3897
03016 Transfer RNA biogenesis [BR:
sno03016
]
Snov_3897
Enzymes [BR:
sno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Snov_3897
Messenger RNA biogenesis [BR:
sno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Snov_3897
Transfer RNA biogenesis [BR:
sno03016
]
Prokaryotic type
tRNA degradation factors
Snov_3897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
ADH91167
UniProt:
D6ZZH2
LinkDB
All DBs
Position
complement(4131673..4133829)
Genome browser
AA seq
718 aa
AA seq
DB search
MFDIHREELDWGGRTLVLETGRMARQADGAVLATYGDTTVLATAVSAKAPKPGQDFFPLT
VNYQEKAYAAGRIPGGYFKREGRPSEKETLVSRLIDRPIRPLFAEGYKNDTQVVVTVLSH
DLENDPDVVSMVAASAALTLSGVPFMGPIGGARVGFIDNEYVLNPTLDEVKESALDLVVA
GTADAVLMVESEAKELAEEVMLGAVMFGHRHFQPVIDAIIRLAEKAAKEPREFAAPDHSA
LETELRGLIEADLRAAYKIARKQDRYAAVDAAKAKAKAHYAALAAEGQAVPEAQTLSEVL
KELEAKIVRWTILDDGVRIDGRDTKTVRPIVSEVGVLPRAHGSALFTRGETQALVVATLG
TGEDEQFIDSLEGTYKERFLLHYNFPPFSVGETGRMGSPGRREIGHGKLAWRAIRPILPP
AHEFPYTLRAVSEILESNGSSSMATVCGTSLALMDAGVPMRRPVAGIAMGLILEGEKFAV
LSDILGDEDHLGDMDFKVAGTDKGVTALQMDIKIAGITEEIMKVALAQAKDGRAHILGEM
AKALTGARAELGEHAPRIEVIQIPVDKIREVIGSGGKVIREIVEKTGAKINIEDDGTVKV
ASASGESIKAALNWIKSIASEPEVGQIYEGTVVKVVDFGAFVNFFGAKDGLVHVSQLAKE
RVAKPSDVVKEGDKVKVKLLGFDERGKTRLSMKVVDQATGEDLEAKGKGDEPEAGAAE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatattcaccgcgaggaactcgactggggcgggcgcacgctcgtcctcgagacc
ggccgcatggcgcgccaggccgatggcgccgtgctcgcgacctatggcgacaccaccgtg
ctcgccaccgccgtttccgccaaggcgccgaagcccgggcaggacttcttcccgctcacc
gtcaactaccaggaaaaggcctacgcggccggccgcatccccggcggctacttcaagcgc
gaaggccgtccgagcgagaaggagaccctcgtctcccgcctgatcgaccgcccgatccgc
ccgctcttcgccgagggctacaagaacgacacccaggtcgtcgtcaccgtgctctcgcac
gatcttgagaacgatcccgacgtcgtctccatggtcgccgcttccgccgcgctcaccctc
tccggcgtgcccttcatgggcccgatcggcggcgcccgcgtcggcttcatcgacaatgag
tacgtgctgaacccgactctcgacgaggtgaaggaatcggccctcgacctcgtggtcgcc
ggcaccgccgacgccgtgctgatggtcgaatccgaggccaaggaactggccgaggaagtg
atgctcggcgcggtcatgttcggccaccgccacttccagccggtgatcgacgccatcatc
cgcctcgccgagaaggccgccaaggagccgcgcgagttcgccgctcccgaccattcggcg
ctcgagaccgagctgcgcggcctgatcgaggccgacctgcgcgccgcctacaagatcgcc
cgcaagcaggaccgctacgccgcggtcgacgccgccaaggccaaggccaaggcgcactac
gccgcgctggcggcggaaggccaggcggttcccgaggcccagaccctgagcgaggtgctc
aaggagctcgaagccaagatcgtccgctggaccatcctcgacgacggcgtgcgcatcgac
ggccgcgacaccaagaccgtccgtccgatcgtctccgaagtcggcgtgctgccgcgcgcc
cacggctcggcgctgttcacccgcggcgagacgcaggccctcgtggtcgctaccctcggc
accggcgaggacgagcagttcatcgacagcctggaaggcacctacaaggagcgcttcctg
ctgcactacaacttcccccccttctcggtcggcgagaccggccgcatgggctcccctggc
cgtcgcgagatcggccacggcaagctcgcctggcgcgccatccgcccgatcctgccgccg
gcgcatgagttcccctacacgctgcgcgccgtctcggagatcctggagtcgaacggctcc
tcctccatggcgaccgtctgcggcacctcgctggcgctgatggacgccggcgtgccgatg
cgccgcccggtggccggcatcgccatgggcctcatcctcgagggtgagaagttcgccgtg
ctctccgacatcctcggcgacgaggaccatctcggcgacatggacttcaaggtggccggc
accgataagggcgtcaccgccctgcagatggacatcaagatcgccggcatcaccgaggag
atcatgaaggtcgccctcgcccaagcgaaggatggccgcgcgcacattctcggagagatg
gccaaggcgctgaccggcgcccgcgccgagctcggcgagcacgccccgcgcatcgaggtg
atccagatcccggtcgacaagattcgcgaagtgatcggctcgggcggcaaggtgatccgc
gagatcgtcgagaagaccggcgccaagatcaacatcgaggacgacggcacggtgaaggtc
gcctccgcctcgggcgagtcgatcaaggccgcgctgaactggatcaagtccatcgcttcc
gagccggaagtcggccagatctacgagggcacggtggtcaaggtcgtcgacttcggcgcc
ttcgtgaacttcttcggcgccaaggacggcctcgtgcacgtctcgcagctcgccaaggag
cgcgtggccaagccgtccgacgtggtcaaggaaggcgacaaggtgaaggtcaagctgctc
ggcttcgacgagcgcggcaagacccgcctgtccatgaaggtcgtcgaccaggcgaccggc
gaggacctcgaagccaagggcaagggcgacgagcccgaggccggcgccgccgagtga
DBGET
integrated database retrieval system
