Sphingomonas nostoxanthinifaciens: K8P63_00045
Help
Entry
K8P63_00045 CDS
T08862
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
snos
Sphingomonas nostoxanthinifaciens
Pathway
snos04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
snos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
K8P63_00045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snos03019
]
K8P63_00045
03009 Ribosome biogenesis [BR:
snos03009
]
K8P63_00045
04131 Membrane trafficking [BR:
snos04131
]
K8P63_00045
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snos04147
]
K8P63_00045
Messenger RNA biogenesis [BR:
snos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
K8P63_00045
Ribosome biogenesis [BR:
snos03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
K8P63_00045
Membrane trafficking [BR:
snos04131
]
SNARE
SNARE associated proteins
Others
K8P63_00045
Autophagy
Aggrephagy
Other aggrephagy associated proteins
K8P63_00045
Exosome [BR:
snos04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
K8P63_00045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
AAA_5
AAA_33
AAA_2
CDC48_2
AAA_14
NACHT
IstB_IS21
TIP49
nSTAND3
AAA_28
RNA_helicase
NPHP3_N
DUF815
AAA_24
AAA_18
AAA_7
ATPase_2
Mg_chelatase
AAA_25
ABC_tran
AAA_17
AAA_19
Parvo_NS1
Sigma54_activat
TsaE
AAA_11
AAA_30
AAA_3
Zeta_toxin
SLFN-g3_helicase
PhoH
bpMoxR
NB-ARC
ATPase
Motif
Other DBs
NCBI-ProteinID:
UAK24659
LinkDB
All DBs
Position
complement(7095..9389)
Genome browser
AA seq
764 aa
AA seq
DB search
MADGETRKMQVANARPEDSGRGLARLSRATMNALGLVEGDVVEIVGKRPTPARAVLPYSE
DEGLEILRLDGLQRANAGVGSGEFVEVRKAASLPAQRVVFAPAQENLRLQGSGDALKRSF
GMRPLTAGDVVATTGQQRIDHGNMPPALRTMLNAPAFSLQEIRLAVVATVPKGIVHIDAN
TEVELRAEYQPARDGGGRRADVTYDDIGGLGSTVDQVREMVELPLRYPELFQRLGVDPPK
GVLLYGPPGTGKTRLARAVANESHAQFFLINGPEIMGSAYGESEKRLREVFEQAAEQAPS
IIFIDEIDSIAPKRGQTSGEAEKRLVAQLLTLMDGLEPRANLVIIAATNRPEAIDEALRR
PGRFDREIVIGVPDERGRREILGIHARGMPLGDRVDLDELSRQTYGFVGADLAALAREAA
IEAVRRIMPRLNLEEKTIPPEVLDTLSVTREDFQEALKRVQPSAMREVMVQAPNVGWDDV
GGLDEARERLREGVELPLKEPDAFRRLGIRPAKGFLLYGPPGTGKTLLAKAVAREAQANF
IATKSSDLLSKWYGESEQQIARLFARARQVAPCVIFIDELDSLVPARGGGLGEPQVTERV
VNTILAEMDGLETLQSVVVIGATNRPNLIDPALLRPGRFDELVYVSVPDEAGRRRILGIH
TGSMPLGDDVDLDMLARRTPRFTGADLEDLVRRAGLSALRRNIEAPNVGADDFAHALEDT
RASVTDEMERDYAQMAARLKQDALAIQPIGFVAPGQLRPHSDRS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcgagacgcgcaagatgcaggtggcgaatgcgcggcccgaggattcggga
cgcgggcttgcccggctgtcgcgcgcaacgatgaacgcgctcgggctggtcgagggcgac
gtggtcgagatcgttggtaagcgcccgacgcccgcgcgcgccgtgctgccttacagcgag
gacgaggggttggagattctccgcctcgacggcctacagcgcgccaatgccggcgtgggt
tcgggcgagtttgtcgaggtgcgcaaggccgcgagcctgcccgcgcagcgcgtcgtgttc
gcgcccgcgcaggagaatctgcgcctgcagggctcgggcgatgcgctcaagcgcagcttc
ggcatgcgcccgctcaccgccggcgacgtggtcgccaccacgggccaacagcgcatcgat
catggcaacatgccccctgccttgcgcacgatgctgaacgcgcccgctttctcgctgcag
gagatccggctggcggtggtcgcgaccgtgccgaaggggatcgtccacatcgacgccaat
accgaggtcgagctgcgcgccgaatatcagccggcgcgcgacggcggcggccggcgcgcc
gacgtcacctatgacgatattggcgggctcggcagcacggtcgatcaggtgcgcgagatg
gtcgagctgccgctgcgctatcccgaattgttccagcgtcttggcgtcgatccgcccaag
ggcgtcttgctctatggcccgcccggcaccggaaagacccggctggcacgcgcggtggcg
aacgagagccatgcccaattcttcctcatcaacgggcccgagatcatgggctcggcctat
ggcgagagcgagaagcggctgcgcgaggtgttcgagcaggctgccgagcaggcgccctcg
atcatcttcatcgacgagatcgactcgatcgcgccgaagcgcggccagaccagcggcgag
gccgagaaacgcctcgtcgcgcaattgctgacgctgatggacgggctggagccgcgcgcg
aacctcgtcatcatcgccgccaccaaccggcccgaagcgatcgacgaggcgctgcgtcgt
ccgggccggttcgaccgcgagatcgtgatcggcgtgcccgacgagcgcggacggcgcgag
atcctcggcatccacgcgcgcggcatgcctttgggcgaccgcgtcgatctcgacgaattg
tcgcgccagacgtacgggttcgtcggcgccgatctcgcggcgctggcgcgcgaggcggcg
atcgaggcggtgcggcggatcatgccgcgcctcaacctcgaggaaaagacgatcccgccc
gaggtgctcgacacattgtcggtgacgcgcgaagatttccaggaggcgctgaagcgcgtc
cagccctcggcgatgcgcgaggtgatggtacaggcgcccaatgtcggctgggacgatgtc
ggcgggctcgacgaggcgcgcgaacgcctgcgcgaaggtgtcgagctgccgctcaaagag
cccgatgccttccgccgactcggcatccgtccggccaagggcttcctgctctacgggccg
cccggcaccggcaagacgctgctggccaaggcggtcgcgcgcgaggcgcaggccaatttc
atcgccaccaaatcgagcgacctgctctcaaaatggtatggcgagagcgagcagcagatt
gcgcgcctgttcgcgcgcgcccgccaggtggcgccgtgcgtgatcttcatcgacgagctc
gacagcctcgtccccgcgcgcggcggcgggctgggcgagccgcaggtgaccgaacgcgtc
gtcaacaccatcctcgccgagatggacgggctggagacgctgcaatcggtggtggtgatc
ggcgcgaccaaccggccgaacctgatcgaccctgccttgctgcgccccggccggttcgac
gaactggtctatgtctcggtgcccgacgaagccgggcggcgccgcatcctcggcatccac
accggcagcatgccgctcggcgacgacgtcgacctcgacatgctggcgcggcgtaccccg
cgtttcaccggcgcggatctcgaggatctcgtccgtcgcgccggtctgtccgcgctgcgc
cgcaacatcgaggccccgaatgtcggcgccgatgatttcgcgcacgcgctggaagatacg
cgcgcaagcgtaaccgacgaaatggagcgcgattatgcgcagatggcagcgcggctgaag
caggatgcgctggcgatccagccgatcgggttcgtcgctcccggacagctgcggccgcat
tccgaccgatcctag
DBGET
integrated database retrieval system
