Sphingomonas nostoxanthinifaciens: K8P63_01620
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Entry
K8P63_01620 CDS
T08862
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
snos
Sphingomonas nostoxanthinifaciens
Pathway
snos00470
D-Amino acid metabolism
snos00550
Peptidoglycan biosynthesis
snos01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snos00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K8P63_01620 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K8P63_01620 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
snos01011
]
K8P63_01620 (murD)
Enzymes [BR:
snos01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
K8P63_01620 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
snos01011
]
Precursor biosynthesis
Amino acid ligase
K8P63_01620 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
NAD_binding_7
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
UAK24940
LinkDB
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Position
343178..344521
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AA seq
447 aa
AA seq
DB search
MIVSPAFSGKRYAVLGLARSGLATVEALLASGARVTAWDGKDEARAKLAAQEGLDLADPL
DIDLVGYDGVVVSPGVPLNRHPIAAKARDAGVPVIGDIELFAQARASLPPHKVVGITGTN
GKSTTTALIHHILQTAGVPSLMGGNIGLPILSQDPLPEGGVYVLELSSYQIDLTFSLDCD
VAVLTNITPDHLDRYDGFEGYAASKARLFGMRGAGHVAVIATEDDQTRAIATQLRHPGAG
RDPVDGAELDPGLRRGDVVEVGSADIVDQSRWPALQGPHNAQNAACAIATCTALGLGDDA
IEAGLASYPGLPHRMERVAEKGGVLYVNDSKATNATATAPALAAYPAIHWILGGLRKTDE
LDDCAPFYGHVRAGYVIGEAAPLFAHILGEAGLPVTESGTLDQAVRDAAATARPGETVML
SPACASFDQFTDYEARGEAFRAAVGAL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtctcgccggccttttcgggcaagcgctacgccgtgctcggcctcgcgcgctcg
ggcctcgcgacggtcgaggcgttgctggcgagtggtgcgcgcgtcacggcgtgggacggc
aaggacgaggcgcgcgccaagctcgccgcccaagaggggctggacctcgccgatccgctc
gatatcgacctcgtcggctatgacggcgtcgtcgtgtcgccgggcgtgccgctcaaccgc
cacccgatcgccgccaaggcgcgcgacgccggcgtgccggtgatcggcgacatcgagctg
ttcgcgcaggcgcgcgcgagcctgccgccgcacaaggtggtcggcatcaccggcaccaac
ggcaagtcgaccacgaccgctttgatccaccacatcttgcagacggccggcgtgccgagc
ctgatgggcggcaatatcggcctgccgatcctgtcgcaggatccgcttcccgaaggcggt
gtctatgtgctggagttgtcgagctaccagatcgacctgacgttcagcctcgactgtgat
gtcgcggtgctgaccaacatcacgcccgaccatctcgaccgctatgacgggttcgagggc
tatgcggcgagcaaggcgcggctgttcggcatgcggggtgcggggcacgtcgcggtgatc
gcgaccgaggacgaccagacgcgcgcaattgccacccaactccgtcatcccggcgcaggc
cgggatccagtcgacggtgcggaactggaccccggcctgcgccggggtgacgtggtcgaa
gtcggatcggccgacatcgtcgatcagtcgcgctggcccgcgctgcaggggccgcacaat
gcccagaacgccgcctgcgccatcgcgacctgcaccgcgctcggcctgggcgacgacgcg
atcgaggccgggctcgcatcctatcccggcctgccgcaccggatggagcgcgtcgccgag
aagggcggcgtcctctacgtcaacgattcgaaggcgaccaacgccaccgcgacggcaccc
gcactcgccgcctaccccgcgatccactggatcctcggcgggctgcgcaagaccgacgag
ctcgacgattgcgcgcctttctacggtcatgtccgcgcgggctatgtgatcggcgaggcg
gcgcccttgttcgcgcatatcctcggcgaggcgggcctgcccgtcaccgagagcggcacg
ctcgatcaggcggtgcgcgatgcggcggcgacggctcggccgggcgagacggtgatgctg
tcgccggcctgcgcctcgttcgaccagttcaccgattacgaagcgcgcggagaagccttt
cgcgcggccgtgggggcgctctaa
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