Sphingomonas nostoxanthinifaciens: K8P63_02570
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Entry
K8P63_02570 CDS
T08862
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
snos
Sphingomonas nostoxanthinifaciens
Pathway
snos03030
DNA replication
snos03430
Mismatch repair
snos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K8P63_02570 (dnaE)
03430 Mismatch repair
K8P63_02570 (dnaE)
03440 Homologous recombination
K8P63_02570 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snos03032
]
K8P63_02570 (dnaE)
03400 DNA repair and recombination proteins [BR:
snos03400
]
K8P63_02570 (dnaE)
Enzymes [BR:
snos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K8P63_02570 (dnaE)
DNA replication proteins [BR:
snos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K8P63_02570 (dnaE)
DNA repair and recombination proteins [BR:
snos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K8P63_02570 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
COE1_HLH
Motif
Other DBs
NCBI-ProteinID:
UAK25111
LinkDB
All DBs
Position
567585..571079
Genome browser
AA seq
1164 aa
AA seq
DB search
MAPAGFVPLRIFSAFTMLEGAIDPKAIAARARALGFPAAAITDRNGLYGAMAFSDAAKKA
GVQPIIGALLGVARPGGAEGKPPVIDWLALLAQDEAGYDNLCALVSAAHLDRPDHEDPHV
SLDLLTRRSDGLIALTGAGDGALARLLAAEQVEAAQRYCAGLEAAFPGRLYIELARRGDA
VEEAAEAALIDLAYARDLPLVATNPASFAEADFHPAHDVMLCIASSSYLEVAERVRSSPE
AWMKPADTMADLFADLPEALANTLVVAQRCAVAAPSRKPILPSLAGDRDGEAAMLRRDAQ
AGLEARLAKLAHLAADRDAYFTRLEFELDVIVQMGFPGYFLIVADFIKWAKEQGIPVGPG
RGSGAGSVVAWALTITDLDPLALGLLFERFLNPERVSMPDFDIDFCETRRGEVISYVQAK
YGRDHVAQIITFGRLKARAVLKDTGRVLQMSYGHVDRLAKLVPNHPTDPWTLGRALNGVS
ELAAEIKADKQVKRLFDLAMKLEGLPRHSSTHAAGVVIGDRPLDQLVPLYRDPRSDFPVT
QFDMKYVEGAGLVKFDFLGLKTLSVLQKAVEMIALQGVALDLPALEWDDEDVYALLQRAD
TVGVFQLESEGMRRTLAAVRPTNFGDIIALVSLYRPGPMDNIPMFGDRKNGRAEIEYPHA
LLETILAETYGIFVYQEQVMQAAQILAGYSLGDADLLRRAMGKKIQAEMDAQRQRFVDGC
ASTNDIAAAKANELFDLIDKFAGYGFNKSHAAAYALVSYHTAWVKAHHRPEFYAASMCYD
ISLTDKLAIWADDMRRSGVELLAPCVNASDAEFTVENGAVRYGLGALKGVGEKAMEQLIV
ERRTNGPFKSLDDFADRVDPRLLNRRQLESLAGGGAFDALAPDRAAVFAAAETILAHAAV
AHDGRHSGQGGLFGGKDAGAPPIRLVAQSRWSVAERMAQEKEAFGFYFSAHPTDRYRHVA
RSEGARSFEQLCRIPVSSEPSRDERGRPVPRPTLRMAALVEEARWRTSARGNRYMLATCS
DATGQFVASSFDDDASEALEAAARTGDCMLLTVELDRRPGEETPRVTVRGARPLDGMTAN
ARLLMEITLESEAAVGSLAAILGQPGGGRGEVVLVVPAGAAPARLRIGRGYALDGDVVEA
IERLGGVSTVTLEPIEPPRLALVS
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgccggattcgtcccacttcgcatcttctctgccttcaccatgctggaaggc
gcgatcgaccccaaggcgatcgccgcccgcgcccgtgcgctcggctttcccgccgcggcg
atcaccgatcgcaacggtctctacggcgcgatggcgttcagcgatgcggcgaagaaggcc
ggcgtgcagccgatcatcggtgcgctgctgggggtcgcccggcctggcggggcggaaggc
aagccgccggtaatcgactggctggcgctgctggcgcaggacgaggccggctacgacaat
ctctgcgcgctcgtctcggcggcacatctcgaccggccggatcacgaggatccccacgtt
tcgctcgatctgctcacccggcgcagcgatggcctgatcgcgctgaccggcgccggcgac
ggcgcgctcgcccgattgctggcggccgaacaggtcgaggcggcgcagcgttactgtgcc
gggctggaggccgccttccccggccggctctatatcgaactggcccggcgcggcgacgcg
gttgaggaggcggccgaggcggcgctgatcgacctcgcttatgcccgcgacctgccgctg
gtggcgaccaatcccgccagcttcgccgaggccgatttccaccccgcgcacgacgtgatg
ctgtgcatcgccagttcctcctatctggaggtcgccgagcgtgtccgctcctcgcccgag
gcgtggatgaagccggccgatacgatggcggacctgttcgccgacctgcccgaggcgctc
gccaacactttggtggtggcgcagcgctgcgccgtcgccgcgccgagccgcaagccgatt
ctgccgagcctcgccggcgatcgcgacggcgaggcggcgatgctccgccgcgacgcgcag
gctgggctggaggcgcggctggccaagctcgcgcacctcgccgccgatcgcgacgcctat
ttcacgcggctggagttcgagctggatgtcatcgtccagatgggcttccccggttacttc
ctgatcgtcgccgatttcatcaagtgggcgaaggaacagggcatcccggtcggccccggc
cgtgggtcgggtgcgggctcggtcgtcgcgtgggcgctcacgatcaccgatctcgatccg
ctggcgctcggcctgctgttcgagcgcttcctcaaccccgagcgcgtgtcgatgcccgac
ttcgacatcgacttctgcgaaacgcggcgcggcgaggtgatctcgtacgtgcaggccaaa
tatggccgcgaccatgtcgcgcagatcatcaccttcggccgcctgaaggcccgggcggtg
ttgaaggataccggccgcgtgctgcagatgagctacggccatgtcgatcggctcgccaag
ctcgtccccaaccatccgaccgatccgtggacgctgggacgcgcgctcaacggcgtgtcc
gagcttgccgccgagataaaggccgacaagcaggtcaaaaggctgttcgatctggcgatg
aagctggaaggcctgccgcgccacagctcgacccatgcggcgggcgtggtgatcggcgat
cggccgctcgaccagctcgtcccgctctatcgcgatccgcgctcggatttcccggtgacc
cagttcgacatgaaatatgtcgagggtgcgggcctcgtgaagttcgacttcctcggcctg
aagacgctgtccgtgctgcagaaggcggtcgagatgatcgcgctgcagggcgtcgcgctc
gatctcccggcgttggagtgggacgatgaagacgtctacgctctgctccagcgcgccgac
acggtcggggtgttccagctcgaatctgaaggcatgcggcgcacgcttgcggcggtgcga
ccgaccaatttcggcgacatcatcgcgctcgtctcgctctaccggccgggtccgatggac
aacatcccgatgttcggcgaccgcaagaacggccgcgccgaaatcgaatatccgcacgct
ctgctcgagacgatcctcgccgagacgtacggcatcttcgtctatcaggaacaggttatg
caggcggcgcagatcctcgccggctattcgctcggtgatgccgatctgctgcgtcgcgcg
atgggcaagaagatccaggccgagatggatgcgcagcgccagcgcttcgtcgacggttgc
gcgtcgaccaacgatatcgccgccgccaaggccaacgagctgttcgatttgatcgacaag
tttgccggctacggcttcaacaagagccacgctgctgcctacgcgctcgtctcctatcac
acggcgtgggtgaaggcgcaccaccggccggaattctacgcggcgtcgatgtgctacgac
atcagcctgaccgacaaattggcgatctgggccgacgatatgcgccgctcgggcgtcgaa
ctgctggcaccctgcgtcaatgcgagcgatgccgagttcacggtcgagaatggcgcggtg
cgctacggcctcggcgcgctcaagggcgtgggcgagaaggcgatggagcagctcatcgtc
gagcgacgcaccaacggcccgttcaagagcctcgacgatttcgccgaccgggtcgatccg
cgcctgctcaaccgccgtcagctcgaaagcctcgccggtggcggggcgttcgacgcgctg
gcgcccgatcgtgcggcggtattcgcggcggccgagacgatcctcgcccatgccgccgtc
gcgcatgacgggcgtcacagcgggcagggcgggctgttcggcggcaaggatgccggcgcg
ccgccgatccgcctcgtcgcgcagtcgcgctggtcggtggcggagcggatggcgcaggag
aaggaggcgttcggcttctatttctcggcgcacccgaccgatcgctatcgccacgtcgcg
cgcagcgaaggtgcgcgcagcttcgagcaattgtgccgcatcccggtttcgtccgagccg
tcgcgcgacgagcgcgggcggccggtgccgcgcccgacgctgcggatggcggctttggtc
gaagaggcgcgctggcgcacctcggcgcgcggcaaccgctacatgctcgccacctgctcg
gatgcgaccgggcagttcgtggcctcaagcttcgacgacgatgcgtcggaggcactggag
gcggcagcgcgtaccggcgactgcatgctgctgaccgtcgagctcgatcggcggcccggc
gaggagacgccgcgcgtgacggtgcgcggcgcccgcccgctcgatggcatgaccgccaat
gcgcggctgctgatggagatcacgctggagagcgaggcggcggtagggtcgctcgcggcg
atccttggccagcccggcggcgggcgcggcgaggtggtgttggtggtgccggcgggcgcg
gcgccggcgcggctgcggatcggccggggttatgcgctcgacggcgacgtggtcgaggcg
atcgagcggctgggcggtgtcagcacggtgacgctcgaaccgatcgagccgccgcgtctc
gcgctggtcagctga
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integrated database retrieval system
