Sphingomonas nostoxanthinifaciens: K8P63_02630
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Entry
K8P63_02630 CDS
T08862
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
snos
Sphingomonas nostoxanthinifaciens
Pathway
snos03420
Nucleotide excision repair
snos03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
snos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K8P63_02630
03430 Mismatch repair
K8P63_02630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snos03400
]
K8P63_02630
Enzymes [BR:
snos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K8P63_02630
DNA repair and recombination proteins [BR:
snos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K8P63_02630
MMR (mismatch excision repair)
Other MMR factors
K8P63_02630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
DUF3553
DarP
Motif
Other DBs
NCBI-ProteinID:
UAK25119
LinkDB
All DBs
Position
complement(584193..586472)
Genome browser
AA seq
759 aa
AA seq
DB search
MPATTNEPAYLRGLNPPQREAVLTTEGPVLVLAGAGTGKTAALTARLAHLIATRRAWPSE
ILAVTFTNKAAREMRERVGRMMGDAVEGMPWLGTFHSIAAKMLRRHAELVGLQSNFTILD
TDDQLRLLKQLIQAADLDEKRWTARALAGLIDRWKNRGWTPAEIDAAESEAFANGRGQEL
YAAYQARLKAVNACDFGDLLLHMLVILKTHRDVLQSYQQRFRYIMVDEYQDTNASQYLWL
RLLAQERKNIACVGDDDQSIYSWRGAEVANILRFERDFPGATVIRLEQNYRSTPHILGAA
SGVIDHNGGRLGKTLWTELDAGEKVRVVGVWDGPEEARRVGEEIESAQRGGTTLDKIAIL
VRAQFQTREFEDRFIAIGMPYRIVGGFRFYERAEIRDALAYLRVIAQPSDDLAFERIVNV
PKRGLGDKAVQKIHQLARAGDLPLTTAAARILDTDELTPQARRALGNLIGDIARWRTKLS
ELPHAELARLMLDESGYTAMLQAERSTEASGRLENLTELARAMEDYETLGAFLEHVSLVM
DNDATADDAKVTIMTIHAAKGLEFDTVFLVGWEEGVFPSQRAVDEGGTASLEEERRLAYV
AITRARRRAHILHAANRRIYGQWTSSIPSRFVGELPAEHIESETTMSGGESLWRAQWSEQ
GDPFAHVHREAPSRAEHRGPGWQRAAQKPLDMSPMRLAEAKASAASFAAKPRADIGLGQR
VFHAKFGYGTIAEIEGNKLEVEFEHAGRKRVLDSFVTLG
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgaccaccaacgagcccgcttacctgcgcggcctcaacccgccgcagcgcgag
gcggtgctgaccaccgaggggccggtgttggtgctggcgggcgcgggcacgggcaagacg
gcggcgctcaccgcgcgcctcgcccacctgatcgccacgcgccgcgcctggccgagcgag
atcctcgcggtcaccttcacaaacaaggccgcgcgcgagatgcgcgagcgcgtcggccga
atgatgggcgatgcggtcgaggggatgccgtggctcggcaccttccattcgatcgcggcc
aagatgctgcgtcggcatgccgaactggtggggctgcaatccaacttcacgatcctcgac
accgacgaccagttgcgcctgctcaagcagctcatccaggcggccgatctcgacgagaaa
cgctggaccgcgcgcgcgctggcgggcctgatcgaccgctggaagaatcgcggctggacg
cctgccgagatcgacgccgccgagagcgaggccttcgccaacgggcgcggccaggaattg
tacgccgcctatcaggcgcggctgaaggcggtgaacgcctgcgatttcggcgacctgctg
ctgcacatgctcgtcattctgaagacgcatcgcgacgtgctgcaatcctaccagcagcgc
ttccgctacatcatggtggacgaatatcaggacaccaacgccagccaatatctatggctg
cggctgctggcgcaggagcgcaagaacatcgcctgcgtcggcgacgacgaccagtcgatc
tattcgtggcgcggcgccgaggtcgccaacatcctgcgcttcgaacgcgactttcccggc
gcgacggtgatccgactggagcagaattaccgatcgaccccgcacatcctcggcgcggca
tcgggcgtgatcgatcataatggcggccgcctcggcaagaccctgtggaccgagctcgat
gcgggcgagaaggtgcgcgtcgtcggtgtgtgggacgggccggaggaggcgcgccgcgtc
ggcgaggagattgagagcgcgcagcgcggcggcaccacgctcgacaagatcgcgatcctc
gtccgcgcccagttccagacgcgcgagttcgaggaccgcttcatcgcgatcggcatgccg
taccgaatcgtcggcggcttccgcttctacgagcgcgccgagattcgcgacgcgctcgct
tacctgcgcgtcatcgcccagccgagcgacgacctcgcgttcgagcgcatcgtcaacgtc
cccaagcgcggcctcggcgacaaggcggtgcagaagatccaccagctcgcacgcgcgggc
gacctgccgctgacgaccgccgccgcgcgcatcctcgacaccgacgaactgacgccgcag
gcgcgccgcgcgctcggcaacctgatcggcgatatcgcgcgctggcggacgaaattgtcc
gagctgccgcatgccgagcttgcgcggctgatgctggacgagagcggctataccgcgatg
ctccaggccgagcgctcgaccgaggcgagcggccggctcgaaaacctcaccgagctcgcc
cgcgcgatggaggattatgaaacgctcggcgcctttctcgagcatgtcagcctcgtcatg
gacaatgacgcgaccgcggacgacgccaaggtgacgatcatgacgatccacgccgccaag
gggctggagttcgacacggtcttcctcgtcggctgggaggaaggcgtcttcccgtcgcag
cgtgcggttgacgaaggcggcaccgccagcctcgaggaggagcgccgcctcgcctacgtc
gcgatcacacgggcgcggcggcgggcgcacatcctccacgccgccaatcgccgcatctat
ggccagtggacgagctccattccttcacgcttcgtcggcgagctgccggcagagcatatc
gagagcgagaccaccatgtccggcggcgagagcctgtggcgcgcgcaatggagcgagcag
ggcgacccgttcgcccacgtccatcgcgaggcgccgtcgcgcgccgagcatcgcggcccc
ggctggcagcgcgcggcgcagaagccgctcgacatgagcccgatgcggctggccgaggcg
aaggcgtccgccgccagcttcgccgccaagccgcgcgccgacatcggcctcggccagcgc
gtgttccacgccaagttcggctacggcacgatcgccgaaatcgagggcaacaagctcgag
gtcgagttcgagcatgccgggcgcaagcgcgtgctcgacagcttcgtcacgcttggctga
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