Sphingomonas nostoxanthinifaciens: K8P63_06290
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Entry
K8P63_06290 CDS
T08862
Name
(GenBank) 3'-5' exonuclease
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
snos
Sphingomonas nostoxanthinifaciens
Pathway
snos03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
snos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
K8P63_06290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snos03400
]
K8P63_06290
DNA repair and recombination proteins [BR:
snos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
K8P63_06290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UAK25740
LinkDB
All DBs
Position
complement(1314929..1315684)
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AA seq
251 aa
AA seq
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MTMHRIRVIDLETTGSRPPAHDVCEIGWQDVVLGGDGRWLVNEERGAILVNPGRPIPPVT
MAVHHIIDQDVAGAPFWRDAAPPVLKPEGGTLGLAAHRASFEQRFCTPQLSGGAPWICTW
KCALRLWPGSPSFSNQVLRYWRMPEGLDRNTGLPVHRAMPDAYVTAHHLRDMLNAASVEQ
LLEWSDLPGLLPRVPAGADRGRGWDELDDEALRRLAADRDEDVRYSAETEVRRRQNQAAP
EAERPRQGVLI
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcatcgcatccgggtgatcgacctggagactaccggctcccggccgcccgcg
cacgacgtctgcgagatcggctggcaggacgtcgtcctcggcggtgatggccgctggctc
gtgaatgaggagcgtggggcaatcttggtgaatccgggcaggcccattccgccggtgacg
atggcggtgcaccacatcattgatcaagacgtggcgggcgctccgttctggcgcgatgct
gctccgccggtcctgaagcctgagggcggaacgctcgggcttgccgcgcatcgagcctcg
ttcgagcagcgcttctgcacgccccagctctcaggaggggcgccctggatctgcacgtgg
aagtgcgcgcttcggctgtggcccggtagccccagcttctccaaccaagtgctgcgctac
tggcgtatgccggagggcctggatcgaaataccggactgcccgtgcaccgcgcgatgccc
gacgcctacgtcacggcgcatcatctgcgcgacatgctgaacgcagcgtcggtcgagcaa
ttgctcgaatggagcgatcttcccggccttctgccgcgcgtgccggcgggcgcggaccgt
ggccgcgggtgggatgagcttgacgacgaggcgttgcggcgccttgcagcggatcgcgac
gaagacgtccgctattcggccgagacagaggttaggcgacggcaaaatcaggctgccccg
gaggcagagcgtccaaggcagggtgtcttgatctga
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