KEGG   Sphingomonas nostoxanthinifaciens: K8P63_13630
Entry
K8P63_13630       CDS       T08862                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
snos  Sphingomonas nostoxanthinifaciens
Pathway
snos03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:snos00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    K8P63_13630 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:snos03400]
    K8P63_13630 (uvrB)
DNA repair and recombination proteins [BR:snos03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     K8P63_13630 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      K8P63_13630 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H Kinesin AAA_16 SWI2_SNF2 DUF87 Microtub_bd SRP54 AAA_22
Other DBs
NCBI-ProteinID: UAK23431
LinkDB
Position
complement(2933446..2935644)
AA seq 732 aa
MAIQIRTSLAEPDTGQSFIPHRPERPDKLEGGKPFRLVSDYEPAGDQPTAIAELVEQALA
GERDQVLLGVTGSGKTFTMAKVVQALQRPALILAPNKILAAQLYGEFKSFFPDNAVEFFV
SYYDYYQPEAYVPRSDTYIEKESSINEAIDRMRHSATRSLLERDDVLIVASVSCLYGIGS
VETYSAMIFDLKKGQTVDQREIIRKLVALQYKRNDQAFARGNFRVRGDTLELFPSHYDDS
AWRISFFGDEIEAITEFDPLTGKTSANLNSVRVYANSHYVTPGPTLKQATEAIRFELTER
LKELNAEGKLLEAQRLEQRTHFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYLP
ENALLFVDESHQTVPQVGGMARGDHRRKITLAEYGFRLPSCIDNRPLRFNEWDAMRPQSV
YVSATPGTWEMERTGGVFSEQVIRPTGLIDPPIDIRPIESQVDDLVHEAKETAKQGYRTL
VTTLTKRMAEDLTEYLHEAGLKVRYMHSDVETLERIELIRDLRLGVYDVLVGINLLREGL
DIPECGLVAILDADKEGFLRSETSLIQTIGRAARNADGKVILYADRITGSMERAMAETQR
RREKQQAYNVEHGITPESVKRNITDIVAHLSSRDQVTVDTGIEDRPHMVGHNLRGYIEDL
EKKMRAAAADLEFEEAGRLRDEIRKLEADELGLPSVEHKAPVRGNSTVGKPGTRQTRYGK
AKQARAEKRGAR
NT seq 2199 nt   +upstreamnt  +downstreamnt
atggccatccagatccgcacgagcctcgccgagcccgacaccgggcagagcttcatcccc
catcgtccggagcgccccgacaagctggaaggcggcaagccctttcgcctcgtctccgat
tacgagccggcaggcgaccagccgaccgcgatcgccgaactggtcgagcaggcgctggcg
ggcgagcgtgatcaggtgctgctgggcgtcaccggatcgggcaagaccttcacgatggcc
aaggtggtgcaggcgctgcagcgccccgcattgattctcgcgcccaacaagatcctcgcc
gcgcagctctatggcgagttcaagagcttctttcccgacaatgcggtcgagttcttcgtc
agttactacgattactaccagcccgaggcctatgtgccgcggtcagacacctatatcgag
aaggaaagctcgatcaacgaagcgatcgaccggatgcgccattcggccacgcgctcgctg
ctcgaacgcgacgatgtgctgatcgtcgcgtcggtgtcgtgcctgtacggcatcggttcg
gtcgagacctattcggcgatgattttcgacctgaagaagggccagacggtcgaccagcgc
gagatcatccgcaagctcgtcgcgcttcagtacaagcgcaacgaccaggcgtttgcgcgc
ggcaatttccgcgtgcgcggcgacacgctcgagctgttcccctcgcattatgacgacagc
gcgtggcggatcagctttttcggcgacgagatcgaggcgattaccgaattcgatccgctg
accggcaagacctcggccaacctcaacagcgtgcgcgtctatgccaacagccattatgtc
acccccggcccgacgctgaagcaggcgaccgaggcgatccgcttcgagctgaccgagcgg
ctcaaggagctgaacgccgagggcaagctgctggaggcgcagcggcttgagcagcgcacc
catttcgatctcgagatgatcgccgcgaccggatcgtgcgccggcatcgagaattattcg
cgcttccttaccggccgcctgccgggcgagccgccgccgaccctgttcgaatatcttccc
gaaaatgcgctgctgttcgtcgacgagagccaccagacggtgccgcaggtcggcggcatg
gcgcgcggcgatcaccggcggaagatcacgctggcggaatatggcttccgcctgccgtcg
tgcatcgacaaccgcccgctgcgcttcaacgagtgggacgcgatgcgcccgcaatcggtc
tacgtctcggcgacgccgggcacgtgggagatggagcgcaccggcggcgtcttctccgaa
caggtgatccgtccgaccgggctgatcgatccgccgatcgacatccgcccgatcgagagc
caggtcgacgatctggtccatgaggcgaaggagacggcgaagcagggctatcgcacgctc
gtcaccacgctgaccaagcgcatggccgaggatctgaccgaatatctgcacgaggcgggg
ctcaaggtccgctacatgcattccgatgtcgagacgctggagcgcatcgagctgatccgt
gatctgcggctcggcgtctacgacgtgttggtcggcatcaacctgctgcgcgaggggctc
gacatccccgaatgcgggctggtcgcgatcctcgacgcggacaaggagggcttcctgcgc
tccgaaacctcgctgatccagacgatcggccgcgccgcgcgcaacgccgacggcaaggtg
atcctctatgcggatcgcatcaccggatcgatggaacgcgcgatggcggagacgcagcgc
cggcgcgagaagcagcaggcttacaatgtcgagcatggcatcacgcccgaaagcgtgaag
cgcaacatcaccgatatcgtcgcgcacctgtccagccgcgatcaggtgacggtcgatacc
ggcatcgaggatcggccgcacatggtcggccacaatctgcgcggctatatcgaggatctc
gagaagaagatgcgcgccgccgccgccgacctcgaattcgaggaggccggccgcctgcgc
gacgagatccgcaagctggaggcggacgaactcggcctgccatcggtcgagcacaaggcg
ccggtgcgcggcaactcgaccgtcggcaagccgggcacccgccagacgcgctacggcaag
gcgaagcaggcgcgcgcggagaagcgcggagcgcggtag

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