Sphingomonas nostoxanthinifaciens: K8P63_15160
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Entry
K8P63_15160 CDS
T08862
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
snos
Sphingomonas nostoxanthinifaciens
Pathway
snos00550
Peptidoglycan biosynthesis
snos01100
Metabolic pathways
snos01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
snos00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K8P63_15160 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K8P63_15160 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
snos01011
]
K8P63_15160 (mrdA)
Enzymes [BR:
snos01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K8P63_15160 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
snos01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
K8P63_15160 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UAK23708
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All DBs
Position
3221331..3223292
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AA seq
653 aa
AA seq
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MKSRVLTDQALAFSFTRRALMLGAAQLGAGGLLVGRMAWLSIAQNAKYDRLAESNRVQSQ
LIPPRRGWIVDRNGRPIAVNRTSFRVDLIPDRLQDPDRAIDELRQLLALSHDDVARIKEA
LDKAPGYQPVPVIENLDYERYAAVSVRQPDLPGVAPSSGFARSYPAGAAVGHLVGYVGPA
TAEQFQATRDPLLITPGFKVGKEGLEKSMEPWLRGKAGAKRTEVTAHGRLVAELTTRPEQ
MGHTLHLTIDAGLQEYAARRLGPNSGAVSVIDVATGGLLAFVSMPAYDPNTFSDGISPTE
WAMLSGNDHLPLTNKVIQGLYPPGSTVKPMVALALLQWGVAADEIVHCSGVYRVGNAQFH
CWRHSGHGPIDMRRAIQQSCDVYFYTMGRRIGIDKIAPMARDLGLGAKFDLPYAMQRYGT
VPDSAWKLRRYKHPWTAADTVNAAIGQGYMLVNPLQLSVLAARIASGRALDPRLVLNRRY
GPQGPSLNIPPSHLELVHLGMRDVVNTGGVGSGSASRLPLAGIEMAGKTGSAQVRRISMA
DRRAGRTASEALPWKYRDHGHFIGFAPVEEPRYAIAVTLEHGNHGGAAGQVARDVMTYLF
APDRAMATLATMESGWGGDIAQRMAADVARWQAGHLQTAADQAPAERSTGEPD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgcgcgtcctgaccgatcaggcgctggctttctccttcacccggcgcgcgctg
atgctcggcgcggcgcagctcggcgcgggcgggctgctggtcggccgcatggcatggttg
tcgatcgcccagaacgccaaatatgatcggctggccgagagcaaccgcgtccagagccag
ctgatcccgccccgacgcggctggatcgtcgatcgcaatggccggccgatcgcggtcaac
cgcaccagctttcgcgtcgatctgatccccgaccggctgcaggatcccgaccgcgcgatc
gacgagctgcgccagctgctcgcgctgagccacgacgacgtcgcgcgcatcaaggaagcg
ctcgacaaggcgcccggctaccagccggtgccggtgatcgagaacctcgattacgagcgc
tacgccgcggtcagcgtgcgccagcccgatctgcctggcgtggcgccctccagcggcttc
gcgcgcagctaccctgcgggcgccgcggtcggccacctcgtcggctatgtcgggccggcc
accgccgagcagtttcaggcgacgcgcgatccattgctcatcacccccggcttcaaggtc
ggcaaggaggggctggagaagtcgatggagccgtggctgcgcggcaaggccggcgccaag
cgcaccgaggtgaccgcgcacggacgcctcgtcgccgagctcaccacccggcccgagcag
atgggccacacgctccatttgacgatcgacgccggcctgcaggaatatgccgcgcgccgg
ctggggccgaacagcggcgcggtatcggtgatcgacgtcgccaccggcggcctgctcgcc
ttcgtgtcgatgccggcctacgatccgaacactttctccgacggtatctcgccgaccgaa
tgggctatgctgtcgggcaacgaccatctgccgctgacgaacaaggtgatccaggggctc
tatccgccgggctccacggtgaagccgatggtcgcgctggcactgttgcaatggggcgtc
gccgccgacgagatcgtgcactgttccggcgtctatcgcgtcggcaatgcgcaattccac
tgctggcggcacagcggccatggcccgatcgatatgcgccgtgcgatccagcagagctgc
gacgtctatttctatacgatgggccgccgcatcggcatcgacaagatcgcgccgatggcg
cgcgatctcggcctcggcgcgaagttcgatttgccttatgcgatgcagcgctacggcacg
gtgccggatagcgcgtggaagctgcgccgctacaagcatccctggaccgcggccgacacg
gtgaacgccgcgatcggccagggttatatgctggtgaacccgctccagctcagcgtgctg
gcggcgcgcatcgccagcggccgcgcgctcgacccgcggctcgtcctcaatcgccgctac
gggccgcagggaccgtcgctcaacattccgccgagccatctggagctggtccatctcggc
atgcgcgacgtcgtcaacaccggcggcgtcggctcgggcagcgcctcgcgcctgccgctg
gccgggatagagatggccggcaagaccggcagcgcgcaggtgcgccgcatctcgatggcc
gatcgccgcgccggccgcaccgccagcgaagccctgccgtggaaatatcgcgatcacggc
cacttcatcggcttcgcgccggtggaggagccgcgctatgcgatcgcggtgacgctggag
catggcaatcacggcggcgccgccgggcaggtcgcgcgcgacgtgatgacctatctgttc
gcgcccgaccgcgcgatggcgacgctcgccacgatggaatccggctggggcggcgacatc
gcccagcgcatggcggccgacgtcgcgcgctggcaggcgggccatctgcagaccgccgcc
gaccaggcgcccgccgaacggagcacgggggagcccgattga
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