Sphingomonas nostoxanthinifaciens: K8P63_16900
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Entry
K8P63_16900 CDS
T08862
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
snos
Sphingomonas nostoxanthinifaciens
Pathway
snos03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
snos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
K8P63_16900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snos03400
]
K8P63_16900
Enzymes [BR:
snos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
K8P63_16900
DNA repair and recombination proteins [BR:
snos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
K8P63_16900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
CAP_N-CM
MTR4_beta-barrel
CCDC93_CC
Motif
Other DBs
NCBI-ProteinID:
UAK24012
LinkDB
All DBs
Position
3582486..3582731
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AA seq
81 aa
AA seq
DB search
MSDDASISDLSFEAALKRLEAIVQRLESGDASLDESITLYAEGDRLRAQCEARLQAAQAR
IEKITLGPDGAPRGVQPFDAG
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgacgcctccatttccgacctgtcgttcgaggccgcgctgaagcggctggag
gcgatcgtccagcggctggaaagcggcgacgcgagcctcgacgaatccattaccctgtat
gccgagggcgaccgtttgcgcgcccagtgcgaggcgcggttgcaggccgcccaggcgcgg
atcgagaagatcacgctcgggccggacggcgcgccgcgcggggtgcaacccttcgatgcc
ggctga
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