Sphingomonas nostoxanthinifaciens: K8P63_17165
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Entry
K8P63_17165 CDS
T08862
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
snos
Sphingomonas nostoxanthinifaciens
Pathway
snos03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
snos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
K8P63_17165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snos03400
]
K8P63_17165
DNA repair and recombination proteins [BR:
snos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
K8P63_17165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
UAK24055
LinkDB
All DBs
Position
complement(3652048..3652959)
Genome browser
AA seq
303 aa
AA seq
DB search
MAARPYWRGQIRLALVSIPVEIFSATKSGAAVAFHQIYEPTGQRIKYEKTVPGIGPVDVD
KIIKGFEYAKGEYVLLDDKEIEGVKLESKKTLELTQFVDSHEIDPIYFDKPYYVVPADDL
AEEAFVVLREALKRSHKIGLGQLAMRGREYVVSIKGCGRGMVMETLRYADEVHKAASYFR
DIGETKPDDDLLDLAQTLIDKKTGAFDASDFHDRYVDALKELIEEKRKGKTIKIEDDKAA
DPRGSNVVDLMAALKKSLGSSATAAKPDAPDEAPKKKPAAKKPAKAKAEAPAEPTKAPAR
KRA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacgtccctactggcggggccagatccggctcgctttggtctcgatcccggtc
gagatcttctccgcgaccaagagcggggccgcggtcgcgttccaccagatctacgagccg
accggccagcgcatcaaatatgagaagaccgtgccgggtatcggcccggtcgacgtcgac
aagatcatcaagggattcgaatacgccaagggcgagtatgtcctcctcgacgataaggag
atcgaaggcgtcaagctggaaagcaagaagacgctcgaactgacccagttcgtcgacagc
cacgagatcgacccgatctacttcgacaagccatactacgtggtgccggccgacgacctc
gccgaggaggcgttcgtggtgctgcgcgaggcgctgaagcgcagccacaagatcgggctc
ggccagctggcgatgcgcggccgcgaatatgtcgtcagcatcaagggctgcggtcgcggg
atggtcatggagacgctgcgctacgccgacgaggtccacaaggcggcgagctacttccgc
gacatcggcgagaccaagcccgacgacgacctgctcgacctcgcgcagacgctgatcgac
aagaagaccggcgctttcgacgccagcgatttccacgaccgctatgtcgatgcgctgaag
gagctgatcgaggagaagcggaagggcaagaccatcaagatcgaggacgacaaggccgcc
gatccgcgcggcagcaacgtcgtcgacctaatggcggcgctcaagaagtcgctcgggtca
tcggccaccgcagcgaagcctgacgcgcccgacgaagcacccaagaagaaaccggctgcg
aagaagccggccaaggcgaaggccgaggcacccgccgaacccacgaaggcgccggcgcgc
aagcgtgcctga
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