Sphingomonas nostoxanthinifaciens: K8P63_17185
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Entry
K8P63_17185 CDS
T08862
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
snos
Sphingomonas nostoxanthinifaciens
Pathway
snos03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
snos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K8P63_17185 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snos03400
]
K8P63_17185 (xth)
Enzymes [BR:
snos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
K8P63_17185 (xth)
DNA repair and recombination proteins [BR:
snos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
K8P63_17185 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UAK24059
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All DBs
Position
3656895..3657728
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AA seq
277 aa
AA seq
DB search
MKIATYNVNGINGRLPVLLRWLEEEQPDIVCLQELKAPDEKFPEVPIRDLGYDAIWHGQK
SWNGVAILSRVGEIHETRCGLPGDPDPTQSRYLEAAVNGVLIAGLYLPNGNPRPGPKFDY
KMAWFDTLIEHAAALFASGAPVVLAGDFNVMPTERDVYKPERWTEDALFAPEVRAAFFRL
LEQGWTDALRTIHPDETIYTFFDYFRNAYARNAGLRIDHFLLSPAPAERLVDAQVDREVR
GWEKTSDHAPVWIELADEAKPPAPARRKAKARPASST
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgccacctacaacgtaaacggcatcaacggccgcttgcccgtcctcctccgc
tggctcgaggaggaacaacccgacatcgtctgcctgcaggagctgaaggcgccggacgag
aagttcccggaagtgcctatccgcgatctcggctacgatgcgatctggcacggtcagaag
agctggaacggtgtcgccatcctcagccgcgtcggcgagatccacgagacccggtgcgga
ctcccgggcgatcccgatccgacgcagagccgttacctcgaagccgccgtcaacggcgtg
ctgatcgccgggctctacctgcccaacggcaatccgcggcccggacccaagtttgactac
aagatggcctggttcgacacgctgatcgaacacgccgcagcgctgttcgcctcaggcgct
cccgtcgtgcttgccggtgacttcaacgtgatgccgaccgagcgggacgtctacaaaccc
gagcgctggaccgaggacgcgctgttcgcgcccgaggttcgcgcggcgttcttccgcctg
ctcgagcaaggttggaccgacgcgctgcggaccattcatccggacgagacgatctacact
ttcttcgactatttccggaatgcctatgcgcggaatgccggcctgcgcatcgatcacttc
ctgctcagcccggcgccggccgagcggctggtcgacgcccaggtcgaccgcgaggtgcgc
ggctgggagaagaccagcgaccacgcgccggtctggatcgagctcgccgacgaggcgaag
ccaccggccccggcacggcggaaagccaaggcaaggcccgcttcctccacctga
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