Sphingomonas nostoxanthinifaciens: K8P63_17610
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Entry
K8P63_17610 CDS
T08862
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
snos
Sphingomonas nostoxanthinifaciens
Pathway
snos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K8P63_17610 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snos03019
]
K8P63_17610 (groL)
03110 Chaperones and folding catalysts [BR:
snos03110
]
K8P63_17610 (groL)
03029 Mitochondrial biogenesis [BR:
snos03029
]
K8P63_17610 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snos04147
]
K8P63_17610 (groL)
Enzymes [BR:
snos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
K8P63_17610 (groL)
Messenger RNA biogenesis [BR:
snos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
K8P63_17610 (groL)
Chaperones and folding catalysts [BR:
snos03110
]
Heat shock proteins
HSP60 / Chaperonin
K8P63_17610 (groL)
Mitochondrial biogenesis [BR:
snos03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
K8P63_17610 (groL)
Exosome [BR:
snos04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
K8P63_17610 (groL)
Exosomal proteins of other body fluids (saliva and urine)
K8P63_17610 (groL)
Exosomal proteins of breast cancer cells
K8P63_17610 (groL)
Exosomal proteins of colorectal cancer cells
K8P63_17610 (groL)
Exosomal proteins of bladder cancer cells
K8P63_17610 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Bap31_Bap29_C
EAD9
Motif
Other DBs
NCBI-ProteinID:
UAK24124
LinkDB
All DBs
Position
3734437..3736083
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFSRDARERILRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELKDKFENMGAQMLREVASKTNDNAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGI
DLAVVKVVEDVKSRSKPVSGSQEVAQVGIISANGDTVVGEKIAEAMEKVGKEGVITVEEA
KGLEFELDVVEGMQFDRGYLSPYFITNPDKMTVELQDPFILIHEKKLSNLQAMLPILEAV
VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTKGEV
ISEDLGIKLESVTLNMLGTAKRVSIDKDNTTIVDGAGEEASIKGRVEAIRKQIESTTSDY
DREKLQERLAKLAGGVAVIKVGGSSEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL
YATKALDGLTGANDDQTRGVDIVRKSLTALVRQIAQNAGHDGAVVSGKLLESNDPQFGFN
AQTETYENLVAAGVIDPTKVVRTALQNAASVAGLLITTEAAVSELPADDKAPAGMPGGGM
GGMGGMDF
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaggacgtcaaattctcgcgtgacgcacgcgagcgcatcctgcgcggcgtg
gatatcctcgccgacgcggtgaaggtcacgctggggccgaagggccgcaacgtcgtgatc
gacaagagcttcggcgcaccgcgcatcaccaaggacggcgtcaccgtcgccaaggagatc
gaactcaaggacaagttcgagaacatgggtgcgcagatgctgcgcgaagtggcctcgaag
accaacgacaatgccggtgacggcaccaccaccgcgaccgttctcgctcaggcgatcgtg
cgcgagggcatgaagtcggtcgcggccggcatgaacccgatggatctgaagcgcggcatt
gatctcgccgtcgtcaaggtcgtcgaggacgtgaagagccgttccaagcccgtctcgggc
agccaggaagtcgcgcaggtcggcatcatctcggccaacggtgacaccgtcgtcggcgag
aagatcgccgaggcgatggagaaggtcggcaaggaaggcgtcatcaccgtcgaggaggcc
aagggcctcgagtttgaactcgacgtcgtcgagggcatgcagttcgaccgcggctacctg
tcgccttacttcatcaccaaccccgacaagatgacggtcgagcttcaggatcctttcatc
ctgatccacgagaagaagctgtcgaacctgcaggcgatgctcccgatcctggaagccgtg
gtgcagagcggccgtccgctcctcatcatcgccgaggacatcgagggcgaggcgctcgcc
acgctcgtcgtcaacaagctgcgcggcggcctgaaggtcgcggccgtcaaggcaccgggc
ttcggcgatcgccgcaaggcgatgctcgaggacatcgcgatcctgaccaagggcgaggtg
atctccgaggatctcggcatcaagctcgagagcgtcacgctcaacatgctcggcaccgcc
aagcgcgtctcgatcgacaaggacaacaccaccatcgtcgacggtgcgggtgaggaagcg
tcgatcaagggccgcgtcgaggcgatccgcaagcagatcgagagcaccacgagcgactat
gatcgcgagaagctgcaggagcggctggccaagctggccggtggcgtcgcggtcatcaag
gtcggcggttcgtccgaggtcgaggtgaaggagcgcaaggatcgcgtcgacgacgcgctg
cacgcgacccgcgccgcggtcgaggaaggcatcgtccccggcggtggtacggctttgctg
tacgccacgaaggcgctcgacggcctgaccggcgcgaacgacgaccagacgcgcggcgtc
gacatcgtccgcaagtcgctgaccgcgctggttcgccagatcgcacagaatgccggccat
gacggcgcggtggtttcgggcaagctgctcgagagcaacgatccgcagttcggcttcaac
gcgcagaccgagacctacgagaacctcgtcgccgccggcgtgatcgacccgaccaaggtc
gtccgcaccgcgctgcagaacgcggcctcggtcgccggcctgctcatcaccaccgaagcg
gcggtgagcgagcttccggccgacgacaaggctcccgcgggcatgcccggcggtggcatg
ggcggcatgggcggcatggatttctga
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