Sphingomonas nostoxanthinifaciens: K8P63_18780
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Entry
K8P63_18780 CDS
T08862
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
snos
Sphingomonas nostoxanthinifaciens
Pathway
snos03030
DNA replication
snos03430
Mismatch repair
snos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K8P63_18780 (holA)
03430 Mismatch repair
K8P63_18780 (holA)
03440 Homologous recombination
K8P63_18780 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snos03032
]
K8P63_18780 (holA)
03400 DNA repair and recombination proteins [BR:
snos03400
]
K8P63_18780 (holA)
Enzymes [BR:
snos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K8P63_18780 (holA)
DNA replication proteins [BR:
snos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K8P63_18780 (holA)
DNA repair and recombination proteins [BR:
snos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K8P63_18780 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HP_1247_M
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
UAK24328
LinkDB
All DBs
Position
3979866..3980891
Genome browser
AA seq
341 aa
AA seq
DB search
MKPAEAALLRALDGADPAIRLYLLHGPDEAGSRALAARLGKALGADAERIDLTSAMLKAD
PARLADEAAAIGLFGGRRWIRLDPAADDACDAIAALLEAPAAGNPVAAIGGTLRKDARLL
KLVQASGAALAHASYLPEGRDADALVTEMARALGLQARPDVARRLASATGGDRAIIGQEL
EKLALYLDAAPERPHPLEHDALDALGAATEEGDLSRLTRAVFSGEPQAVDEELARLASEG
VEGITVLRALSRRALQLAQLRAQMAAGDSVEHVMQTAGRAIFWKEQAQIRAELMRWTPEG
LATAIGRLAEAERQVKSPGYPGHALVEQELLAISRFAARRR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccggccgaagccgcgctgctgcgcgcgctcgacggcgccgatccggcgatccgc
ctctatctgctgcacggccccgacgaggcgggatcgcgcgcgctcgccgcgcggctcggc
aaggcgctgggcgcggatgccgagcggatcgacctcacctcggccatgctcaaggccgat
ccggcccggctggcggacgaggcggcggcgatcggcctgttcggcgggcgccgctggatc
cggctcgatcccgccgctgacgatgcctgcgatgccattgcggcgttgctggaggcaccg
gcagcgggcaatccggtcgccgcgatcggcggaaccctgcgcaaggatgcgcgcctgctg
aagctcgtccaggcaagcggcgcggcgcttgcccatgcgagctatctgcccgaaggacgc
gacgccgatgcgctggtgaccgagatggcacgcgcgctcgggctgcaggcgcggccggac
gtcgcgcgccggctggcctccgccaccggcggcgatcgcgcgatcatcgggcaggagctg
gagaagctcgccctctatctcgatgccgcccccgaacggccgcacccgctggagcatgac
gcgctggacgccctgggtgccgcgaccgaggaaggcgacctttcgcgcctgacgcgcgcg
gtcttctccggcgagccgcaggcggtcgacgaggagctggcgcggctcgcgagcgaaggg
gtggaggggatcacggtgttgcgtgccttgtcgcgccgggcgttgcagctggcgcagctg
cgggcgcagatggcggcgggcgacagcgtcgagcatgtgatgcagaccgcggggcgcgca
atcttctggaaggagcaggcgcagatccgcgccgaactgatgcgctggacgccggagggg
ctggcgaccgccatcggccggctggcggaggcggaacggcaggtgaagtcgcccggttat
cccggacatgcgctcgtcgaacaggaactgttggcaatcagccgcttcgccgcacgccgg
cgttag
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