Sphingomonas nostoxanthinifaciens: K8P63_20150
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Entry
K8P63_20150 CDS
T08862
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
snos
Sphingomonas nostoxanthinifaciens
Pathway
snos00061
Fatty acid biosynthesis
snos00071
Fatty acid degradation
snos01100
Metabolic pathways
snos01212
Fatty acid metabolism
snos02024
Quorum sensing
snos04146
Peroxisome
Module
snos_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
snos00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K8P63_20150
00071 Fatty acid degradation
K8P63_20150
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K8P63_20150
09145 Cellular community - prokaryotes
02024 Quorum sensing
K8P63_20150
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
snos01004
]
K8P63_20150
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snos04147
]
K8P63_20150
Enzymes [BR:
snos01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K8P63_20150
Lipid biosynthesis proteins [BR:
snos01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K8P63_20150
Exosome [BR:
snos04147
]
Exosomal proteins
Exosomal proteins of breast milk
K8P63_20150
Exosomal proteins of breast cancer cells
K8P63_20150
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UAK24579
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All DBs
Position
4218829..4220571
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AA seq
580 aa
AA seq
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MLDLDTMPNLVALFFRQAADQGDAPFLWAKDADRWQPLSWRESAIRVAKLAEALRALGLE
RGDRVMLVAENRPEWAIADLAIMAAGGITVPAYTSNTVADHVHVAENSGARAAIVSTAKL
AKPLLQALARSSTCDIAITIEPGPRERIGALRLYEWQALLDAQPGDVAACAAGAGFARSD
TACIIYTSGTGGSPRGVPQHHGAILRNVAGCRQIILDDFAHGDEVFLSLLPLSHAYEHSG
GLHLPIALGAQIYYAESIDRLAANIEEVRPTIMIVVPRLFELLRARILKQIEKQGGLAQR
LLERALALGRKERRGIADRPLDLLLDLTIRRKIRARFGGRLKALVSGGAPLNPEVGGFFD
ALGLTLLQGYGQTEAGPVISCNRPRAGIRLDTVGPPLDGVTVRIAPDGEILVQGENVMHG
YWRNDAETARVLVDGWLHTGDVGHVDDAGRIVITDRKKDLIVNDKGDNVSPQRVEGMLTI
EPEIAQAMVAGDRRPYLVGLVVPDAEWRATLPPGADPARLLMAAVDRVNAGLSTTERVRR
ILVADEPFAIENGELTPSLKVRRHVLRARYGARLDALYAR
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatctcgacacgatgccgaacctcgtcgccttgttcttccggcaggcggcggac
cagggcgatgcgcccttcctgtgggcgaaggatgccgaccgctggcagccgctgagctgg
cgcgagagcgcgatccgtgtcgcgaaattggccgaggcgttgcgcgcgctggggctggag
cgcggcgaccgggtgatgctggtggcggagaaccgccccgaatgggcgatcgccgatctc
gcgatcatggcagcgggtggcatcaccgtgccggcctataccagcaacaccgtggccgat
catgtccacgtcgccgagaatagcggcgcgcgcgcggcgatcgtctccaccgcaaagctc
gcgaagccgctgctgcaggcgctggcgcgctcctcgacctgcgacatcgcgatcacgatc
gagccgggcccacgcgagcggatcggcgcgctgcggctgtacgagtggcaagcgctgctc
gatgcgcagccgggcgacgtcgccgcctgtgctgcaggggcgggcttcgcgcggagcgac
accgcctgcatcatctatacgagcggcaccggcggctctccgcgcggcgtgccgcagcat
cacggcgcgatcctgcgcaacgtcgccggctgccgccagatcatcctcgacgatttcgcg
catggcgacgaggtgttcctgagcctgctgccgctgagccacgcctacgagcattcgggc
gggttgcacctgccgatcgcgctgggcgcgcagatctattatgccgagagcatcgaccgg
ctcgccgccaatatcgaggaggtgcggccgacgatcatgatcgttgtgccgcgcctgttc
gagttgctgcgcgcgcgcattctgaaacagatcgagaagcagggcggcctcgcccagcgc
ctgctggagcgcgcgctggcgctgggccgcaaggaacggcgcgggatcgcggatcgtccg
ctcgacctgctgctcgacctgaccatccggcgcaagatccgcgcgcgcttcggcgggcgg
ctgaaggcgctcgtctcgggcggcgcgccgctcaatcccgaggtcggcggcttcttcgac
gcgctggggctgaccctgctgcagggctatggccagaccgaggcggggccggtcatttcg
tgcaaccgcccgcgcgcgggcatccggctcgacacggtcgggccgccgctcgacggcgtc
accgtgcgcatcgcgcccgatggcgagatcctcgtccagggcgagaatgtgatgcacggc
tattggcgcaacgatgccgagaccgcgcgcgtgctggtcgacggctggctgcacaccggc
gacgtcggccatgtcgacgatgccggtcgcatcgtcatcaccgatcgcaagaaggatctg
atcgtcaacgacaagggcgacaatgtctcgccgcagcgggtcgagggcatgctgacgatc
gagcccgagatcgcgcaggcgatggtggcgggcgaccgccggccctatctggtcgggctg
gtggtgcccgatgccgaatggcgcgcgacgctgccgccgggggccgatcccgcgcgcctg
ctgatggcggcggtcgaccgcgtgaacgccggcctgtcgaccaccgagcgggtgcggcgc
atcctggtggccgacgaacccttcgcgatcgagaatggcgagctgacgccgtcactgaag
gtgcggcgccacgtgctgcgcgcccgctacggcgcgcgcctcgacgcgctctacgcgcgc
tga
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