Sphingomonas nostoxanthinifaciens: K8P63_20535
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Entry
K8P63_20535 CDS
T08862
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
snos
Sphingomonas nostoxanthinifaciens
Pathway
snos03030
DNA replication
snos03430
Mismatch repair
snos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K8P63_20535 (dnaQ)
03430 Mismatch repair
K8P63_20535 (dnaQ)
03440 Homologous recombination
K8P63_20535 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snos03032
]
K8P63_20535 (dnaQ)
03400 DNA repair and recombination proteins [BR:
snos03400
]
K8P63_20535 (dnaQ)
Enzymes [BR:
snos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K8P63_20535 (dnaQ)
DNA replication proteins [BR:
snos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K8P63_20535 (dnaQ)
DNA repair and recombination proteins [BR:
snos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K8P63_20535 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
DUF3131
Motif
Other DBs
NCBI-ProteinID:
UAK24646
LinkDB
All DBs
Position
complement(4290218..4290925)
Genome browser
AA seq
235 aa
AA seq
DB search
MREIVFDTETTGLSPQEGHRLVEIGCVEIVNRVPTGQTFHAYINPERSMPSEAEAVHGLS
AIFLSDKPCFHLVAEELIAFLGDSPLVAHNATFDFAFLNWELAQCGHPSVAMTRMIDTLA
IARTRHPGAKHSLDALCSRYGVDRSQRVKHGALLDAELLAQVYVELCGGRQIGFMLAAEN
ADAAISAEAVAVRNAAPLIVRPPRPHHASAAELERHAAFIQKLVDPLWAQVPATA
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcgggagatcgtcttcgataccgaaaccaccggcctgagcccccaggagggccatcgg
ctggtcgagatcggctgtgtcgagatcgtcaatcgcgtgccgaccggccagaccttccat
gcctacatcaatcccgaacgctcgatgccgagcgaggccgaggcggtgcacgggctgtcg
gcgatcttcctgtcggacaagccctgcttccatctcgtcgccgaggagctgatcgcgttc
ctgggcgacagtccgctggtcgcgcacaacgccacgttcgacttcgccttcctcaactgg
gagctggcccagtgcggccatccgtcagtggcgatgacccgcatgatcgacacgctggcg
atcgcccgcacgcgccatcctggcgcgaagcacagcctcgacgcgctttgcagccgatat
ggtgtcgatcgcagccagcgcgtcaagcatggcgccttgctcgatgccgagcttcttgcg
caggtctatgtcgagctgtgcggcggtcgccagatcgggttcatgctcgcagccgagaac
gccgatgccgccatatcggccgaagccgtagctgtgcgtaacgcggcgccgttgatcgtc
cgtccgccacgcccgcatcatgcgagcgcggcggaactggaacgccacgccgcgtttatc
cagaagctggtcgatccgctgtgggctcaggtgcccgccacggcttga
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