Streptococcus pneumoniae AP200 (serotype 11A): SPAP_0599
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Entry
SPAP_0599 CDS
T01309
Name
(GenBank) Predicted hydrolase of the metallo-beta-lactamase superfamily
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
snp
Streptococcus pneumoniae AP200 (serotype 11A)
Pathway
snp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPAP_0599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snp03019
]
SPAP_0599
Messenger RNA biogenesis [BR:
snp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SPAP_0599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
SUFBD_core
GPW_gp25
Motif
Other DBs
NCBI-ProteinID:
ADM84192
LinkDB
All DBs
Position
567542..569203
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AA seq
553 aa
AA seq
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MSNISLTTLGGVRENGKNMYIAEIGESIFVLNVGLKYPENEQLGVDVVIPNMDYLFENSD
RIAGVFLTHGHADAIGALPYLLAEAKVPVFGSELTIELAKLFVKGNDAVKKFNDFHVIDE
NTEIDFGGTVVSFFPTTYSVPESLGIVLKTSEGSIVYTGDFKFDQTASESYATDFARLAE
IGRDGVLALLSDSANADSNIQVASESEVRDEITQTIADWEGRIIVAAVSSNLSRIQQIFD
AADKTGRRIVLTGFDIENIVRTAIRLKKLSLANEILLIKPKDMSRFEDHELIILETGRMG
EPINGLRKMSIGRHRYVEIKDGDLVYIATAPSIAKEAFVARVENMIYQAGGVVKLITQSL
HVSGHGNVRDLQLMINLLQPKYLFPVQGEYRELDAHAKAAMAVGMLPERIFIPKKGTTMA
YENGDFVPAGSVSAGDILIDGNAIGDVGNVVLRDRKVLSEDGIFIVAITVNRREKKIVAR
ARVHTRGFVYLKKSRDILRESSELINQTVEDYLQGDDFDWADLKGKVRDNLTKYLFDQTK
RRPAILPVVMEAK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatatcagtttaacaacacttggtggtgtgcgtgagaatggaaaaaatatgtac
attgctgaaattggagagtccatttttgttttgaatgtagggttaaaatatcctgaaaat
gaacaattaggggtcgatgtggtgattccaaacatggattacctttttgaaaatagcgac
cgtattgctggggttttcttgacccacgggcatgcggatgcgattggtgctctaccttat
ctcttggcagaggctaaagttcctgtatttgggtctgagttgaccattgagttggcaaag
ctctttgtcaaaggaaatgatgccgttaagaaatttaatgatttccatgtcattgatgag
aatacggagattgattttggtgggacagtggtttccttcttccctacgacttactccgtt
ccagagagtctgggaattgtcttgaagacatcggaaggaagcatcgtttatacaggtgac
ttcaaatttgaccaaacggctagtgaatcttatgcaactgattttgctcgtttggcagag
attggtcgtgacggcgtcctggctctcctcagtgattcggccaatgcagacagcaatatt
caggtggctagtgaaagtgaagttagggatgaaattacccaaactattgctgactgggaa
ggtcgtatcatcgttgcagctgtttccagtaatctttctcgtattcagcagatttttgac
gctgcggataaaacaggtcgacgtatcgtcttgacaggatttgatattgaaaatatcgtc
cgcacagcgattcgtcttaagaagttgtctttagccaacgaaattctcttgattaagcct
aaagatatgtctcgctttgaagaccatgagttgattattcttgagacaggtcgtatgggt
gaacctatcaatggacttcgtaagatgtcgattggtcgccatcgttatgtagaaatcaag
gatggggacctggtctatattgctacggctccgtctattgctaaagaagcctttgttgcg
cgtgtagaaaatatgatttatcaggcaggtggggttgtcaaattgattacccaaagttta
catgtatcagggcacggaaatgtgcgtgatttgcagctgatgatcaatcttttgcaacct
aagtacctcttccctgtccaaggggagtatcgtgagttggatgctcacgctaaggctgcc
atggcagttgggatgttgccagaacgcatcttcattcctaaaaaggggacgaccatggct
tacgagaatggagactttgttccagctggatcggtttcagcaggagatatcttaattgat
gggaatgccattggtgatgttggaaatgttgttcttcgtgaccgtaaggtcttgtcagag
gatggaattttcatcgtggctattacagtcaaccgtcgtgagaagaaaattgtggctaga
gctcgtgttcacacgcgtggatttgtttatctcaagaagagtcgcgatattctccgtgaa
agttcagaattgattaaccaaacggtagaagattatcttcaaggagatgactttgactgg
gcagatcttaaagggaaggttcgagataatttgaccaagtatctctttgaccaaaccaag
cgtcgtccagctattttaccagtagtcatggaagcaaaataa
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