Streptomyces nodosus: CP978_00105
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Entry
CP978_00105 CDS
T06839
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
snq
Streptomyces nodosus
Pathway
snq00521
Streptomycin biosynthesis
snq00523
Polyketide sugar unit biosynthesis
snq00525
Acarbose and validamycin biosynthesis
snq00541
Biosynthesis of various nucleotide sugars
snq01055
Biosynthesis of vancomycin group antibiotics
snq01100
Metabolic pathways
snq01110
Biosynthesis of secondary metabolites
snq01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
snq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CP978_00105 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CP978_00105 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CP978_00105 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CP978_00105 (rfbB)
00525 Acarbose and validamycin biosynthesis
CP978_00105 (rfbB)
Enzymes [BR:
snq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CP978_00105 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
NAD_binding_10
NmrA
DUF1501
adh_short
Motif
Other DBs
NCBI-ProteinID:
QEV37212
UniProt:
A0A5P2VWP0
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Position
complement(27708..28715)
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AA seq
335 aa
AA seq
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MRLVVTGGAGFIGSHFVKHLLAGVYPAFRTAHVTVLDKFTYAGSRSNLSEVIDHPRLTVA
EGDICDDPLVERLLVDADIVVHFAAESHVDRSIAAADSFIRTNVMGTHCLLAAALRARVA
RFVHISTDEVYGSIAGTDRWDEHSPVAPNSPYSASKAGSDLLALSYYRTHGLPVCVTRCS
NTYGSHQHPEKVIPRFVTRLLRGERVPLYGDGSHVRDWLHVDDHCQGVALVAADGTPGRV
YNIGGGIELSNRDLTRRILALLGADWSQVEHVVDRKGHDLRYALTADRIRTELGYRPTVA
FDDGLARTVAWYTRHPEWWEPLCTVDSSRLREVPA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctcgtcgtcaccggaggggccggcttcatcggctcgcacttcgttaagcacctc
ttggctggcgtgtaccctgcgttccgcaccgcccatgtcaccgtactcgacaagttcacc
tatgcgggaagccgcagcaacctgagtgaggtgatcgaccatccgcggctgactgtcgcg
gagggagatatctgcgacgaccccctggtggagcgtctgctggtcgacgccgacatcgtc
gtccacttcgcggccgagtcgcacgtcgaccggtcgatcgccgcggctgactcgttcatc
cgcaccaatgtcatgggcacccactgcctgctcgcagcggcgctaagggcacgggtggcc
cggttcgtgcacatctccaccgacgaggtgtacggatcgatcgcggggaccgaccgttgg
gacgagcactctcccgtcgcacccaactccccgtactccgcctccaaggccggctccgac
ctgctcgccctcagctactaccgcacccacggcctgcccgtctgcgtcacacggtgctcc
aatacgtacggctcccaccagcacccggagaaggtcatcccccgcttcgtaacgcgtctg
ctgaggggagagcgagtccccctgtacggagacggctcccacgtacgcgactggctgcac
gtcgacgatcactgccagggtgtcgccctggtggcagccgacggtacgccagggcgggtg
tacaacattggaggaggcatcgaactgagcaatcgggacctgacccggcgcatcctcgcc
ctgctcggcgcggattggtcccaggtcgagcacgtggtcgacagaaagggccacgacctg
cggtatgccctgacggccgacaggatccgcactgagctggggtaccggcccactgtggcc
ttcgatgacggtctggcgcgtaccgtggcttggtacacgcgtcatccggagtggtgggag
ccactgtgcaccgtcgattcctcccgcctgcgggaggtgcctgcatga
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