Streptomyces nodosus: CP978_02420
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Entry
CP978_02420 CDS
T06839
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
snq
Streptomyces nodosus
Brite
KEGG Orthology (KO) [BR:
snq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snq03400
]
CP978_02420
Enzymes [BR:
snq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CP978_02420
DNA repair and recombination proteins [BR:
snq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CP978_02420
Prokaryotic type
CP978_02420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QEV37546
UniProt:
A0A0B5DG25
LinkDB
All DBs
Position
465433..466806
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AA seq
457 aa
AA seq
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MRTSIVVFTCDLRLSDHPPLRAALRGGRRVVPLFVRDRSVDAAGFAAPNRLAFLADCLGD
LDARLRQRGGRLVLREGETVMEVCRVATEADAEEVHMAGDVSAFAIARERRLRRALEAEG
RRLYVHDTVSTAVAPGAVTPASSDHFAVFTPYYRRWSAQGLRDVLDAPRAITVPEEVGSA
SLPERGEVSGVSPGLCAGGETEGRRRLAAWLRSGVDAYAERHDDLAGDATSRLSPHLHFG
TLSPVEVVYRAGRAGGAGAEAFVRQIAWRDFNRQVLAARPDAAVRDYRTRHDRWRRGKRA
EADAEAWRDGRTGYPVVDAAMRQLRQEGWMHNRGRLLAASFLTKTLYIDWRVGARHFLDL
LVDGDVANNQLNWQWMAGTGTDTRPNRVLNPVAQGKRYDPDGSYVRRWVEELADVKGAVV
HEPWRLPAQERSRTGYPEPVVSLAEGLARFKQARDRA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcggacctcgatcgtcgtgttcacctgcgatctgcgactgtcggaccacccgccgctg
cgcgcggccctgcggggaggacgccgggtggtaccgctgttcgtacgtgaccggtccgtg
gacgcagcgggtttcgccgcgccgaaccggctcgccttcctcgccgactgcctgggggac
ctggacgcgcggctacggcaacggggcggccgactggtgctacgcgagggcgaaacggtc
atggaggtgtgccgggtggccaccgaggcggacgccgaggaggtgcacatggcgggcgat
gtgagtgccttcgcgatcgcgcgcgaacggcggctgcgccgggcgctggaggccgagggg
cggcgtctgtatgtgcacgacacggtgagcaccgccgtggcgccgggcgcggtgacgccg
gcctcctccgaccacttcgcggtgttcaccccgtactaccggcgctggtccgcccagggc
ctgcgggacgtgctggacgcaccgcgcgcgatcaccgtgccggaggaggtgggctccgct
tcgctgccggagcgcggcgaggtgagcggcgtgtcgccggggctgtgcgcgggcggcgag
acggaggggcggcgcaggctcgccgcgtggctgcgctccggcgtggacgcctatgcggaa
cggcacgacgacctggcgggcgacgccacctcccggctctccccccaccttcacttcggc
acactgtcgccggtcgaggtggtgtaccgggccggcagggccggcggcgcgggggcggag
gcgttcgtacggcagatcgcctggcgcgacttcaaccgtcaggtgctcgccgcacgcccc
gacgccgccgtacgcgactaccgcacccgccacgaccggtggcgccgggggaagcgggcg
gaggcggatgccgaggcgtggcgggatggccgcaccggctatccggtggtggacgcggcg
atgcggcagctgcgccaggagggctggatgcacaaccggggccggctgctggcggcgagc
ttcctcaccaagacgctgtacatcgactggcgggtgggcgcccggcacttcctggacctg
ctggtcgacggcgacgtggcgaacaatcagctgaactggcagtggatggccggtacgggc
accgacacccggcccaaccgggtgctcaaccccgtcgcccagggcaagcgatacgacccg
gacggatcctatgtgcggcgctgggtggaggaactggcggacgtgaagggggccgtcgtg
cacgagccgtggagacttccggcgcaggagcgctcgaggaccggttaccccgagccggtg
gtgtccctggcggagggcttggcccgcttcaagcaggcccgggatcgcgcttga
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