Streptomyces nodosus: CP978_04900
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Entry
CP978_04900 CDS
T06839
Name
(GenBank) Y4yA family PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
snq
Streptomyces nodosus
Pathway
snq00300
Lysine biosynthesis
snq00470
D-Amino acid metabolism
snq01100
Metabolic pathways
snq01110
Biosynthesis of secondary metabolites
snq01120
Microbial metabolism in diverse environments
snq01230
Biosynthesis of amino acids
Module
snq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
snq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CP978_04900
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CP978_04900
Enzymes [BR:
snq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CP978_04900
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Ala_racemase_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QEV37960
UniProt:
A0A0B5D7N7
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All DBs
Position
complement(1102706..1104205)
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AA seq
499 aa
AA seq
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MDAPLYLRPRVDPPLASLLRAGTFLHSLVDALGSPLNVLLPETVAENARRFRAVYSRHRL
TGRVYFAHKANRSSALVRRLAAEDVAAVGVDVASLEELRHALSCGFTGDRILATGPKDAE
FLWLAARVGATVNLDSPNELEQLSALVRTHGLGRVAVLVRLSGFESADGHGGAGTRLLSR
RSRFGTPLRDAEELLSALERNADAVELTGVAYHLDTTGVEEKVRALEQCVLFMDTCRARG
LAPRAVDIGGGFGIGYVAEAGEWERWTTALSEAVLGSRPPLTWRGHGYGLRNEGGTVRGA
VALYPGHRPTAGPGYLDELLSLPAPVLGRSSANLLLEHLHDLYIEPGRALVDQCGLTLAR
VLDVRLADADSGHHLVRLGMNAGDMSLEEHGVLVDPVLLPRGKPEEGEEGPVGVFLAGNL
CLEADLITRRLVHLPRLPRPGDLLAFANTAGYAMDFHAHRAQRQPFARTVAVERQGDDDW
RWCPDEDYWPIPSPGGTSA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgcccttgtatctgaggccacgggtggatccgccgctcgcctcgctgctgagg
gccggaacgtttctgcactcgctggtcgacgcgctggggtccccgctcaacgtgctgctc
cccgagaccgtcgccgagaacgcccggcgcttccgtgccgtctacagccgtcaccgtctc
accgggcgcgtgtacttcgcgcacaaggcgaaccggtccagcgcgctggtgcggagactg
gcggcggaggacgtggccgccgtcggtgtcgacgtcgcctcgctcgaggaactgcggcac
gccctgagctgcgggttcaccggtgaccggatcctggccaccggccccaaggacgcggag
ttcttatggctggcggcacgggtgggagccacggtgaacctcgactcgccgaacgagctc
gaacaactctccgccctggtgcggacgcacggtctcggccgtgtcgccgtgctggtgcgg
ctgtccggattcgagtcggccgacggccacgggggagcgggcacccgcctgctctcacgg
cgcagccgcttcggcaccccgctgcgggatgcggaggagctgctgtcggccctcgaacgg
aacgcggacgccgtcgagttgaccggtgtcgcctaccacctggacaccaccggcgtggag
gagaaggtccgggccctggagcagtgtgtgctgttcatggacacctgccgggcgcgtggc
ctcgccccgcgcgccgtcgacatcggcggcgggttcggaatcggctatgtcgccgaggcc
ggggagtgggaacggtggaccaccgcgctgagcgaggcggtgctcggcagccgcccaccg
ctgacctggcgcggccatggttacgggctgcgcaacgagggcggcacggtgcgcggggcc
gtggcgctgtatccgggccaccgtcccaccgccggccccggctatctcgacgaactcctc
tcgctgcccgcaccggtcctgggccggtcgtcggcgaacctcctcctggaacacctccac
gacctctacatcgaacccggtcgtgccctggtcgaccagtgcgggctgaccctcgcacgc
gtgctggacgtgcggctcgcggacgccgactccgggcatcacctggtgcgcctcgggatg
aacgcgggggacatgagcctcgaggagcacggcgtcctggtggaccccgtgctgctgccg
cgcgggaagccggaggagggcgaggaaggtccggtcggcgtctttctggccggcaatctc
tgcctggaggccgatctgatcacccgccgcctggtccaccttccccggctgccgcgcccg
ggcgatctgctggccttcgccaacaccgccggctacgcgatggacttccacgcccaccga
gcgcagcgacagccgttcgcgagaacggtcgcggtggaacggcagggcgacgacgactgg
cgctggtgtccggacgaggactactggccgatcccatccccggggggaacaagcgcatga
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