Streptomyces nodosus: CP978_08720
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Entry
CP978_08720 CDS
T06839
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
snq
Streptomyces nodosus
Pathway
snq03030
DNA replication
snq03430
Mismatch repair
snq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP978_08720
03430 Mismatch repair
CP978_08720
03440 Homologous recombination
CP978_08720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snq03032
]
CP978_08720
03400 DNA repair and recombination proteins [BR:
snq03400
]
CP978_08720
Enzymes [BR:
snq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CP978_08720
DNA replication proteins [BR:
snq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CP978_08720
DNA repair and recombination proteins [BR:
snq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CP978_08720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
HisKA_3
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QEV38628
UniProt:
A0A0B5D9S4
LinkDB
All DBs
Position
1918491..1919504
Genome browser
AA seq
337 aa
AA seq
DB search
MLEDRTTTAHPGGWPTAYPEGYAVVDVETTGLARDDRIISAAVYRLDARGEVEDHWYTLV
NPERDPGPVWIHGLTSETLAGAPLFRDIAEEFAARLSGRVLVAHNAVFDWSMIAREYARA
EREAPVRQRLCTIALSKELGLPLANHKLETLAAHFGVVQQRAHHALDDARVLAEAFRPSL
RAAARDGVRLPLLECRPLTEWSASPTIGRQSTGGYRGAAAWRPSRKRPACPYPNPGRYQE
GKPLKQGMRIAFSGDTSTERDLLEDRAVEAGLHVATSLSRLTSLLVTNDPDSGTSKTVKA
RQFGTPVVDEAAFGQLLRDVEPAAGQPGAAAPAPERR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagaccgtacgaccacagcgcacccgggcggctggccgaccgcgtaccccgag
gggtatgcggtcgtcgacgtggagaccaccggactcgcccgggacgaccggatcatctcg
gccgccgtctaccggctggacgcacgcggcgaggtcgaggaccactggtacacgctggtc
aacccggagcgcgacccgggacccgtctggatccacggtctgacgagcgagacgctcgcc
ggggcgccgctcttccgtgacatcgccgaggagttcgccgcccggctctccggccgtgta
ctggtcgcccacaacgcggtcttcgactggtcgatgatcgcccgggagtacgcacgcgcg
gagcgtgaggccccggtccgtcagcggctgtgcaccatcgcgctctccaaggagctgggc
ctgccgctggccaaccacaagctggagacgctggccgcgcacttcggcgtcgtccagcag
cgggcgcaccacgcgctggacgacgcccgggtgctggccgaggcgttccggccgagtctg
cgggccgccgcgcgggacggcgtacgccttccactgctggagtgccgcccgctgaccgag
tggtccgcctcccccacgatcgggcggcagtccaccgggggctaccggggggccgccgcc
tggcgcccgtcccgcaagcgccccgcctgcccctaccccaacccgggacgctaccaggag
ggcaaacccctcaaacagggcatgcggatcgccttctccggtgacacctccaccgagcgg
gacctgctggaggaccgggccgtcgaggcgggactccatgtggcgacgagcctgtcccgg
ctcaccagcctgctggtcaccaatgatcccgactcgggcacctccaagacggtcaaggcc
cggcagttcgggacgccggtggtcgacgaggcggcgttcgggcaactgctgagggacgtg
gagccggccgccgggcagccgggagcggcggcaccggcgccggagcggcgctga
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