Streptomyces nodosus: CP978_09965
Help
Entry
CP978_09965 CDS
T06839
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
snq
Streptomyces nodosus
Pathway
snq03030
DNA replication
snq03430
Mismatch repair
snq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP978_09965
03430 Mismatch repair
CP978_09965
03440 Homologous recombination
CP978_09965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snq03032
]
CP978_09965
03400 DNA repair and recombination proteins [BR:
snq03400
]
CP978_09965
Enzymes [BR:
snq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CP978_09965
DNA replication proteins [BR:
snq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CP978_09965
DNA repair and recombination proteins [BR:
snq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CP978_09965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QEV43184
UniProt:
A0A0B5DAG3
LinkDB
All DBs
Position
complement(2186724..2190263)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHTAKKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTMWAVNSTGLHNIFRL
SSDAYAEGWLQKWPRMDKETIAQWSEGIVASTGCPSGELQTRLRLGQYDEALKAAADYQD
IFGKDRYFLELMDHGIDIERKVRDGLLEIGRKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFKFDGTGYYLKSTEEMYAIDSSDAWQEGCANTLLVAEMVDTTGMFVEKN
LMPKFDIPDGYTEITWFKEEVRRGMERRFPGGIPEDRQKQAEYEMDVIISMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERISMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLDGITNPSHPRYNEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSETITEHVPVWVRHTDGVTITQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMVKS
NKGIDIDLLSLPLDDPKTFELLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMDSHTNYALRKNKLQEITPIHKELEEPLEEVLAVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFTIFQAGAQKNGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANHPAEYMAGLLTSVKDDKDKSAVYLNECRRMGIRVLPPNVNES
QSNFAAQGDDVILFGLSAVRNVGTNVVESIIKSRKAKGKYASFPDYLDKVEAVVCNKRTT
ESLIKAGAFDEMGHTRKGLTAQYEPMIDNVVAVKRKEAEGQFDLFGGMGEEENSEPGFGL
DVVFTDEEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGISQLTGGEHADGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELQVPDLSAAGTNAPVVLTIPAMKVTPPMVSRLGEILSQHKGDSEVRI
KLQGPSRTTVLRLDRHRVKPDPALYGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctgaaggacatgttcaacgcctgcaacgagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctgcacggggcgtacgacttcttccataccgcgaagaaggcc
ggggtcaccccgatcatcgggatcgaggcgtatgtcgcccccgagtcccggcgcaacaag
cgcaagatccagtggggccagccgcaccagaagcgggacgacgtctccggttccggcggt
tacacccacaagacgatgtgggcggtgaacagcaccgggctgcacaacatcttccgtctc
tcctcggacgcctacgccgagggctggctccagaagtggccccggatggacaaggagacg
atcgcccagtggtccgagggcatcgtcgcctccaccggctgcccgtccggggagctccag
acccggctgcgtctcggccagtacgacgaggccctgaaggcggccgccgactaccaggac
atcttcggcaaggaccgctacttcctggagctgatggaccacggcatcgacatcgagcgc
aaggtccgcgacggactgctggagatcggccggaagctgggcatcccgccgctggtcacc
aatgactcgcactacacctacgcgcacgaggcgaccgcccatgacgccctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttcaagttcgacggcaccggctactac
ctgaagtccaccgaggagatgtacgccatcgactcctcggacgcctggcaggagggctgc
gccaacacgctcctcgtcgccgagatggtcgacaccacgggcatgttcgtcgagaagaac
ctgatgccgaagttcgacatccccgacggctacacggagatcacctggttcaaggaggag
gtccgccgcggcatggagcgccgcttccccggcggcatccccgaggaccgccagaagcag
gccgagtacgagatggacgtcatcatctcgatgggcttccccggctacttcctggtggtc
gccgacttcatcatgtgggccaagaacaacggcatcgcggtcggtcccggccgcggctcc
gcggccggctcgatcgtcgcctacgccatgggcatcaccgacctcgatccgatcccgcac
ggcctgatcttcgagcggttcctcaaccccgagcgcatctcgatgcccgacgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtgatcaggtatgtgacggagaagtacggcgcc
gacaaggtcgccatgatcggcacgtacggcaagatcaaggccaagaacgcgatcaaggac
tccgcgcgtgtgctgggctacccgtacgcgatgggcgaccggctcaccaaggcgatgccc
gccgatgtcctcggcaagggcatcgatctggacggcatcaccaacccctcgcacccgcgc
tacaacgaggcgggcgagatccgggggatgtacgagaacgagccggacgtgaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtccggcagatgggcgtgcatgccgccggc
gtgatcatgtccagcgagaccatcaccgagcatgtgcccgtctgggtccggcacaccgac
ggcgtgaccatcacgcagtgggactacccgagctgcgagtcgctcggcctgctgaagatg
gacttcctcggcctgcgcaacctgacgatcatggatgacgccgtcaagatggtgaagtcc
aacaaggggatcgacatcgatctcctcagcctcccgctggacgaccccaagaccttcgaa
ctgctccagcgcggcgacacactcggtgtgttccagttcgacggcggccccatgcgctcg
ctgctgcgcctgatgaagcccgacaacttcgaagacatctcggccgtgtcggcgctctac
cgtcccggcccgatgggcatggactcgcacaccaactacgcgctgcgcaagaacaagctc
caggagatcacgccgatccacaaggagctcgaggagcccctcgaggaggtcctcgcggtc
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgcgggc
tactcgctcggcgaggccgacatcctccgccgcgtgatgggcaagaagaagcccgaggag
ctggcgaagaacttcaccatcttccaggccggtgcccagaagaacggctacagcgacgag
gccatccaggccctgtgggacgtgctggtccccttcgccggctacgcgttcaacaaggcc
cactcggccgcgtacggcctggtgtcgtactggaccgcctatctgaaggccaaccacccc
gccgagtacatggccggactgctcacctcggtcaaggacgacaaggacaagtcggcggtc
tacctcaacgagtgccgccgcatgggcatccgggtgctcccgcccaacgtcaacgagtcc
cagtccaacttcgccgcccagggcgacgacgtgatcctcttcgggctctccgcggtgcgc
aacgtcggtaccaacgtcgtcgagtcgatcatcaagtcccgcaaggccaaggggaagtac
gcctccttccccgactacctcgacaaggtcgaggcggtggtctgcaacaagcgcaccacc
gaatcgctgatcaaggccggcgccttcgacgagatggggcacacccgcaagggcctcacc
gcgcagtacgaaccgatgatcgacaatgtggtcgcggtcaagcgcaaggaggccgagggg
cagttcgacctcttcggcggcatgggcgaggaggagaacagcgagcccggcttcggcctc
gacgtcgtcttcaccgacgaggagtgggacaagacctatctgctcgcccaggagcgggag
atgctcggtctgtatgtctccgaccatccgctcttcgggctggagcatgtcctgtccgac
aaggccgacgcgggcatctcccagctcaccggcggtgagcacgcggacggcgcggtggtc
accatcggcggcatcatctcgggcctccagcgcaagatgaccaagcagggcaacgcctgg
gcgatcgccaccgtcgaggacctcgcgggctcgatcgagtgcatgttcttcccggcgacc
taccagttggtgtcgacccaactcgtcgaggacgcggtggtgttcgtcaagggccgcctc
gacaagcgggaggacgtgccgcggctggtcgccatggagcttcaggtgccggacctctcg
gccgcgggcaccaacgcgccggtggtgctcaccatcccggcgatgaaggtcaccccgccg
atggtgagccgtctcggtgagatcctcagccagcacaagggcgacagcgaggtgcggatc
aagctccaggggccgagcaggaccaccgtgctccggctggaccggcaccgggtcaagccg
gaccccgcgctctacggcgacctgaaggtcctgctcggcccgtcctgcctggccggctga
DBGET
integrated database retrieval system
